Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3865 |
Symbol | |
ID | 8532291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4269867 |
End bp | 4270583 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | two-component response regulator |
Protein accession | YP_003261205 |
Protein GI | 261823099 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000288449 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACGC CGCACATTCT TATTGTTGAA GACGAGTTGG TAACCCGTAA TACCCTCAAA AGTATTTTTG AGGCCGAAGG GTACGTTGTC CACGAAGCCA CCGATGGCGC AGAAATGCAC CATATTTTGT CCGAAAATGA CATCAATCTG GTGATCATGG ACATCAATCT GCCAGGGAAA AACGGCCTAT TGCTGGCACG TGAGCTGCGT GAGCAAGCCA CCGTTGCCTT GATGTTCCTC ACCGGTCGTG ACAATGAAGT TGATAAGATT CTTGGTCTGG AAATCGGTGC GGATGATTAC ATCACCAAAC CGTTCAACCC ACGTGAATTG ACGATCCGCG CACGTAACCT GCTGTCACGC ACCATGAATT TGGGCAGTGG CACTGAAGAA CGTCGTCTGG TGGAAAGCTA CCGCTTCAAC GGCTGGGAAC TGGATATCAA TAGCCGTTCT CTGATCAGCC CGGCTGGCGA GCAATACAAG CTGCCGCGCA GTGAATTCCG CGCCATGCTG CACTTTTGCG AAAACCCGGG CAAGATTCAG TCCCGTGCTG AGCTGCTGAA GAAAATGACG GGCCGTGAGC TTAAGCCGCA TGACCGTACC GTTGATGTCA CCATCCGCCG TATCCGCAAG CACTTTGAAT CAACCGCAGA CACACCGGAA ATCATCGCGA CGATCCACGG TGAAGGCTAC CGCTTCTGCG GCGATCTGGA TAACTAA
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Protein sequence | MQTPHILIVE DELVTRNTLK SIFEAEGYVV HEATDGAEMH HILSENDINL VIMDINLPGK NGLLLARELR EQATVALMFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLSR TMNLGSGTEE RRLVESYRFN GWELDINSRS LISPAGEQYK LPRSEFRAML HFCENPGKIQ SRAELLKKMT GRELKPHDRT VDVTIRRIRK HFESTADTPE IIATIHGEGY RFCGDLDN
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