Gene Pecwa_3860 details

Gene Information

• Locus tag: Pecwa_3860
• ID: 8532286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4262354
• End bp: 4263127
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 48%
• Product: hypothetical protein
• Protein accession: YP_003261200
• Protein GI: 261823094

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.516724
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTATTA CTATTTCACC CGCAAAAACG CTCGACTACA CCAGTCCGTT GGCAACAACG 
CGTTACACCC AGCCGGAACT CCTGAACTAT TCCAGCCAGT TAATTAACGT GTGTAAAAAG 
CTGACGCCAG CACAGATCGC CTCACTGATG AGCATCAGCG ATAAATTAGC TGACCTGAAC 
GCGGGCCGCT TTAACGAGTG GCACCCAGAT TTCACGCCGG ATAATGCGCG CCAGGCGCTG 
TTGGCATTTA AGGGCGACGT CTACACCGGA TTAGCCGCAG AAGATTTCAG CGAAGATGAC 
TTTGATTTCG CCCAGCAGCA TCTGCGTATG CTGTCAGGTC TATACGGCGT GTTGCGCCCA 
CTGGATTTGA TGCAGCCGTA TCGGCTGGAA ATGGGCACCA AACTGGAAAA TAAAGCCGGT 
AAAGATCTCT ACAGCTTCTG GGGCGATACC ATTACCGAAA AACTGAATCA GGCGCTACAC 
GATCAAGGCG ACGACGTACT GATTAATCTG GCATCGGATG AGTATTTCAA AGCCGTTAAA 
CCGAAAAAAC TCAATGCTCG TTTGATCAAG CCCGTCTTTT TAGATGAGAA AAACGGTAAA 
TTTAAGGTGA TCAGCTTCTA CGCCAAGAAA GCGCGCGGCC TGATGAGTCG TTTCATTATT 
CAAAACCGTC TAACTCAACC GGAACAGTTG AAAGCCTTTA ATCTGGACGG TTATTTCTTC 
GAGGCAGCAG ACTCGTCAAA TGACGAACTG GTGTTTAAGC GCCACGAACA GTAA 

 

Protein sequence

MLITISPAKT LDYTSPLATT RYTQPELLNY SSQLINVCKK LTPAQIASLM SISDKLADLN 
AGRFNEWHPD FTPDNARQAL LAFKGDVYTG LAAEDFSEDD FDFAQQHLRM LSGLYGVLRP 
LDLMQPYRLE MGTKLENKAG KDLYSFWGDT ITEKLNQALH DQGDDVLINL ASDEYFKAVK 
PKKLNARLIK PVFLDEKNGK FKVISFYAKK ARGLMSRFII QNRLTQPEQL KAFNLDGYFF 
EAADSSNDEL VFKRHEQ