| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3851 |
|---|
| Symbol | nhaA |
|---|
| ID | 8532277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4251668 |
|---|
| End bp | 4252864 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | pH-dependent sodium/proton antiporter |
|---|
| Protein accession | YP_003261191 |
|---|
| Protein GI | 261823085 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.79655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACAA TGATTCGCCG CTTTATTCGC TTGGATGTGG CCGCTGGCGT GGTGCTAATG
ATGGCAACAG TGTTGGCGAT CTTACTTGCC AATTGGTCTG TTACTGCTTT GGGCTATCAA
CAATTCCTGA TGATGCCAGT GGAAATGCGC TTTGGCGCGC TGGAAATCAA TAAGAACCTG
CTGCTGTGGA TTAATGATGG TTTGATGGCG ATTTTTTTCC TGCTGATTGG TTTGGAAGTA
AAACGCGAGT TAATCGAAGG TACGTTAGCT AGTCGTCAGC AGGCGATGTT GCCATTGGCT
GCTGCGGTAG GTGGAATGGT TTTTCCCGCT TTGTTCTTTC TGCTTTTTAA TGCGAATGAT
GAGGTGACGC GCGTTGGCTG GGCGATTCCC GCTGCGACAG ATATCGCGTT TGCCATTGGG
GTACTGACGC TATTGGGCAA GCGTGTTCCA GCAGGGTTGA AAGTCTTCCT GCTGGCGCTG
GCGATCATTG ACGATCTGGG GGCGATCCTG ATTATCGCTC TGTTTTATAC GCAGCAGATT
TTCTGGCCTG CGCTGGGGGG GGCGGTGCTG GCAATCGCGG TGCTGGCCTA TATGAACCGA
CAGCAGGTCA TGAAAACATC TGCCTATTTG CTGGTGGGGA TCGTTTTGTG GGTGTGCATT
CTGAAATGTG GCGTTCATGC GACGCTGGCT GGTGTGATCG TTGGATTCTT TATTCCTTTG
CGCACGTCAG GCGAGCAGCC TTCTCCGGCA ATCACGCTGG AGCATGGCTT ACAAACGTGG
GTCGCATTTC TGATTATTCC GCTGTTTGCC TTCGCTAATG CAGGCATTGT TTTACAAGGA
ATTGTGCTGG AAAAACTGTT TTCCCCGTTG AGCCTCGGTA TCGCTGCTGG GCTACTGATC
GGCAAACCAC TGGGCATTAC TTTGTTCAGT TGGCTAACCC TTCGGCTGGG CTATGCGCGT
CTGCCTGCTG GTGTACACTT TAACCAGATT GCGGCGGTCT CTATGCTGTG TGGTATCGGC
TTTACTATGT CGATATTTAT TACGCTGCTG GCATTCTCTG GCGGTGATGA GGAGTTGATT
ACCTACGCCA AGCTGGGGAT CTTGCTGGCG TCAGGGCTGG CAGCGCTGCT TGGTTATCTG
GCATTGCGCG GGGTGTTGCC CGCGCTGGAC AAGGTGATGC AACCGTGCAA GGGTTGA
|
|---|
| Protein sequence | MITMIRRFIR LDVAAGVVLM MATVLAILLA NWSVTALGYQ QFLMMPVEMR FGALEINKNL
LLWINDGLMA IFFLLIGLEV KRELIEGTLA SRQQAMLPLA AAVGGMVFPA LFFLLFNAND
EVTRVGWAIP AATDIAFAIG VLTLLGKRVP AGLKVFLLAL AIIDDLGAIL IIALFYTQQI
FWPALGGAVL AIAVLAYMNR QQVMKTSAYL LVGIVLWVCI LKCGVHATLA GVIVGFFIPL
RTSGEQPSPA ITLEHGLQTW VAFLIIPLFA FANAGIVLQG IVLEKLFSPL SLGIAAGLLI
GKPLGITLFS WLTLRLGYAR LPAGVHFNQI AAVSMLCGIG FTMSIFITLL AFSGGDEELI
TYAKLGILLA SGLAALLGYL ALRGVLPALD KVMQPCKG
|
|---|
| |