Gene Pecwa_3827 details

Gene Information

• Locus tag: Pecwa_3827
• ID: 8532253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4226414
• End bp: 4227067
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 56%
• Product: pseudouridine synthase
• Protein accession: YP_003261168
• Protein GI: 261823062

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCCT ATAATCCGCC TACCGATCCC TGGTTGCACA TTCTTTACCA GGATCAGCAC 
ATCATGGTGG TGAATAAACC CAGCGGGCTA CTGTCGGTTC CCGGCCGTGC GCCAGAACAC 
AAAGACAGCG TCATGAGCCG CATTCAGGCT GACTACCCCG CGGCCGAATC CGTTCATCGT 
CTGGATATGG CAACCAGCGG CGTGATTGCC GTTGCACTCA CAAAAGCTGC CGAGCGCGAA 
TTAAAGCGCC AGTTTCGCGA GCGTGAACCT AAGAAATGCT ACCTTGCTCG CGTCTGGGGG 
CATATGGCGC AGGATGAAGG CGTTATCGAT CTGCCACTGA TCTGCGACTG GCCGAACCGC 
CCGAAACAGA AAGTCTGCTT TGAAACAGGA AAATCAGCAC AGACGGAGTA TCAGGTACTC 
TCGCGTGACG ATGACGGTAC GACACGCGTC AAGCTGATGC CGATTACCGG TCGTTCTCAT 
CAACTGCGCG TCCACCTGCT CGCACTCGGC CACCCTATCC TCGGCGATGG CTTTTACGCA 
CATCCCGATG CCAAAGCGAT GGCCCCCCGC CTTTTACTGC ACGCACAAGA GTTAGCGATC 
ACACACCCAG CGTTCAATAC CCCGATGCAC TTTCGTTGTG AGGCAGATTT CTGA 

 

Protein sequence

MEPYNPPTDP WLHILYQDQH IMVVNKPSGL LSVPGRAPEH KDSVMSRIQA DYPAAESVHR 
LDMATSGVIA VALTKAAERE LKRQFREREP KKCYLARVWG HMAQDEGVID LPLICDWPNR 
PKQKVCFETG KSAQTEYQVL SRDDDGTTRV KLMPITGRSH QLRVHLLALG HPILGDGFYA 
HPDAKAMAPR LLLHAQELAI THPAFNTPMH FRCEADF