Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3815 |
Symbol | |
ID | 8532241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4212360 |
End bp | 4213130 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | SNARE associated Golgi protein-related protein |
Protein accession | YP_003261156 |
Protein GI | 261823050 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGCGT GGCTGGATCA TCTGGTTACC CAATCACTCG CGTATTCGCT GATCGCCGTC ATGCTGGTTG CCTTTCTGGA ATCTCTGGCT CTGGTGGGCC TGCTGTTGCC GGGCACGGTG ATGATGGCAA CGCTGGGGGC GCTGATCGGT AGCGGACAAA TGGGGCTGTA TTCTGCGTGG GCGGCTGGAA TTATCGGCTG CCTGCTAGGG GATTGGATTT CCTATTTTAT TGGCGTGCGT TTCAAAGCGC CGCTGCATAA CTGGTCTTTC CTGAAAAAGT ATCAGACATT AGTAAATAAA ACCGAATATG CTCTGTATCA ACACCCAATG CCGACGATAT TGATCGGGCG CTTTGTCGGC CCGACGCGGC CGTTAATCCC GATGGTAGCG GGAATGCTGG GGTTGCCTCC GTATAAATTT GCCGTGCCGA ATATCATCGG CTGCCTGCTG TGGCCACCAG CCTATTTCTT ACCCGGCATT TTGGCTGGGG TGGCAATTGA TATTCCCGCA GACACGAACA GCGCGGGTTT TAAGTGGTTA TTATTGGTAA CGGCCGTCGC CGTGTGGGTC GCAGGCTGGT TAAACTGGCG CTGGTGGCGC AGTGATAAGC GTAAACATCC TGATTGGTTT AGCAGAATGA TGCCGCTCAG ACGCCTGCGT TGGGCGGTTC CGGCGATATC TGTGGCGGCG GTTGCATCGT TGATCGCGCT GATTCAGCAC CCGCTGATGC CAGTTTACCG GCACCTGCTA TGGCAGGTGC TCAACGGGTA G
|
Protein sequence | MEAWLDHLVT QSLAYSLIAV MLVAFLESLA LVGLLLPGTV MMATLGALIG SGQMGLYSAW AAGIIGCLLG DWISYFIGVR FKAPLHNWSF LKKYQTLVNK TEYALYQHPM PTILIGRFVG PTRPLIPMVA GMLGLPPYKF AVPNIIGCLL WPPAYFLPGI LAGVAIDIPA DTNSAGFKWL LLVTAVAVWV AGWLNWRWWR SDKRKHPDWF SRMMPLRRLR WAVPAISVAA VASLIALIQH PLMPVYRHLL WQVLNG
|
| |