Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3764 |
Symbol | |
ID | 8532190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4156617 |
End bp | 4157822 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | type IV pilin biogenesis protein |
Protein accession | YP_003261106 |
Protein GI | 261823000 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.511689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGTTAG TGCGCTTATA TCACTGGCAA GCCATTACAT CCGAGGGCGA ATTTGCTGAT GGTGAACTCA TTAGCACACA TCGCCAGCAC GCTTATGCTA GCCTAATTGC TCAGGGCTAT CAGCCGCTCA CCGTAAAGAC CGGCCATTAT GTGTTGCCCC GCTACTGGAA ACGCGAACAG CTCGGTGAGT TAATCAAGCA GCTTGCCGCC CTGCTACAAG CCGGTTTGCC ACTGCTGGAA GCATTAAAAT TGGTGTCAGA GCAGCATGAG CGCCCCGGCT GGCGTTGCAT ATTACGAGAC ATCCGCACTC ATGTTGCTCA GGGAAACTCG CTGTCTGAGG CATTGCACGA CTATCCTCAT ATCTTCCCTG TCCTGTATCG ATCCCTCATT GCCGTCGGCG AATTGACGGG GAAGCTAGAC GTATGCTGCC TACAGCTAGC ACAACAGCAA GAGAAGCAAT CCAGACTGCA ACAGAAAGTC ATCAAAGCGC TACGCTATCC CTGTTTTGTT TTGGTCATCG CCATGCTGGT CAGCATGATG ATGTTGACGC TGGTTCTGCC CGAGTTTGCG ACACTCTACT CCTCGTTCAA TACGCCGTTG CCGTGGTTTA CCCGGCAGTT ACTTCATCTG GCAGATATTA TCGCTGGTTA CGGATTCATT GGATTACTGC TTCTTAGTTG CCTGATATTA GGGTACGCCC GATTGAGACA GAAAAAACCA TTATGGAAAA TAAGGGAACA AGAATGGCTA TTGAAGCTTC CGGTAGTATC CAGTTTGCTA CGCGGTAAAT CGCTGAACCA GATATTCAAT ATTCTGGCCA TGACGCAGCA TGCCGGTTTG ACGCTCCCAG AAGGGCTGGA TGCGGCAGCA ACGATCCGTC ATCCGCTTTA TCAGGCCGCG ATTCAACAGA TACAAACGCA GTTGCATCAG GGGACGTCGC TATACCATGC CACACAGCAT CACATCGCGC TGTTCCCGGC ACCTTGTCCG CAGTTGATTC GGGTTGGGGA AGAAACCGGA TCGCTGGATG CAATCTTTAC ACAGTTAGCA GAATGGCATG AGAGGCGGGT GCAACAACAG GCCGATATGC TGACACAAAC GCTGGAGCCG TTATTGATGA TGGTCGTCGG CGGAATGGTC GGGGCGCTAG TGATTGGCAT GTATTTGCCT ATCTTCCAAC TGGGGAATGT ATTGGCTGGC GCCTGA
|
Protein sequence | MRLVRLYHWQ AITSEGEFAD GELISTHRQH AYASLIAQGY QPLTVKTGHY VLPRYWKREQ LGELIKQLAA LLQAGLPLLE ALKLVSEQHE RPGWRCILRD IRTHVAQGNS LSEALHDYPH IFPVLYRSLI AVGELTGKLD VCCLQLAQQQ EKQSRLQQKV IKALRYPCFV LVIAMLVSMM MLTLVLPEFA TLYSSFNTPL PWFTRQLLHL ADIIAGYGFI GLLLLSCLIL GYARLRQKKP LWKIREQEWL LKLPVVSSLL RGKSLNQIFN ILAMTQHAGL TLPEGLDAAA TIRHPLYQAA IQQIQTQLHQ GTSLYHATQH HIALFPAPCP QLIRVGEETG SLDAIFTQLA EWHERRVQQQ ADMLTQTLEP LLMMVVGGMV GALVIGMYLP IFQLGNVLAG A
|
| |