| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3745 |
|---|
| Symbol | |
|---|
| ID | 8532171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4132606 |
|---|
| End bp | 4133934 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | MmgE/PrpD family protein |
|---|
| Protein accession | YP_003261087 |
|---|
| Protein GI | 261822981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATC AGACTGATAT CACCGCAACG CTTGCCCACT ACATTATCCA TAGCGAGCCG
AACCAAGACG CGATTAATGC CGCCCGTGAA GGGGTAACTG ACTTCATCTC CACCGCACTT
CCGATCGCAC AAGGCGCACT TGTCGATAGT GGCCTCGCGC CGTTAAAGCA GGTATTCAGC
GGCACGGATA GTCTGACGCG TAGCCTGATT TTGGGTTATA CCGGCCACGT ACTGGACTTT
GACGATTATC ACCCTGCATT TCGCGGCCAC CCCAGCACCG TCATTCTGCC TGCACTGTTT
TCCCTTGCAG CAGAAGACGC ATCCGTTACG GAAGACGCAT TTTTGACAGC CTATGCGATC
GGCGTAGAAG CCGCTGGCAG AATCGGGCTG GCATGCGGCC CGCGTCATTA CAGCCTCGGT
TACCACAACA CGGCCACGCT CGGGGCTATC GCCGCCGCCG CTGCGGCTGC ACGTCTGGTT
GATGCATCGG TAGCACAGAC ACAAATTATT CTTGGCCTTG CGGCTACCCA AGCCGCCGGG
TTGCGGGCAC AGTTTGGTTC AGCGGTCAAA CCGCTACACG CCGGACTTGC CGCCAGAGCA
GGATTGACGG CCGTTAAACT GGGGTTAGCG GGCTTCGAAG GCAACACGCA ACGGGTGGTT
GAAGCATTTC TTACCGCGCA TGGCGATCAA AAACAACAGC CGGAACTGCT GGTGGAAAAC
TGGGGAGCGC CATGGCGTAT TCTTTCTCCC GGTTTAGAAT TCAAACGCTA CCCGACCTGT
GGCGGAACCC ACAGCGCCGC TGAAGCCGCG TTTGCGTTAC GGGAGCAGTG GCATAAGCAG
AACGGCGCGA ACGCCAATTT GGCCGACGCC ATCGAACGTA TCACCGTGAC CTTCCCACCG
GGTGGCGATG TTGCTCCCTT TATCCGTAAC GCGACAAACG GCGTAGAGGC ACGGTTCAGT
CTGGAATATG TCATTGCGGC TGCGCTGATT GAAGGGGAGC TAAAGCTGGC GCATTTTTCG
GAAGCGCCGG TTGAAACAGC GATCGCAGCG CTGGCGAAGC GCGTCATACG CTCCGCCGAT
GAAACCGCCC CACCTGATGA GCTTGATCCG GAAGCGCGTT TTCACGAGGT TACGCTGCAT
TTGCGTGACG GCAGCGCGCT AATCCAGCGC ACCACGCGTC AGGAAACCTC AGCACGCCCC
ACCGATCTGC GGGCCAAATT GCAGCAAACT ATCGGCTCTC TGGCGCATCT CGACAGTAAC
CAGATCGCCG ATCGTTGTGC ATTACGGCAA GCAGGCGATC TACGCTATTT GCTTGGGCTG
TTATTTTAA
|
|---|
| Protein sequence | MTNQTDITAT LAHYIIHSEP NQDAINAARE GVTDFISTAL PIAQGALVDS GLAPLKQVFS
GTDSLTRSLI LGYTGHVLDF DDYHPAFRGH PSTVILPALF SLAAEDASVT EDAFLTAYAI
GVEAAGRIGL ACGPRHYSLG YHNTATLGAI AAAAAAARLV DASVAQTQII LGLAATQAAG
LRAQFGSAVK PLHAGLAARA GLTAVKLGLA GFEGNTQRVV EAFLTAHGDQ KQQPELLVEN
WGAPWRILSP GLEFKRYPTC GGTHSAAEAA FALREQWHKQ NGANANLADA IERITVTFPP
GGDVAPFIRN ATNGVEARFS LEYVIAAALI EGELKLAHFS EAPVETAIAA LAKRVIRSAD
ETAPPDELDP EARFHEVTLH LRDGSALIQR TTRQETSARP TDLRAKLQQT IGSLAHLDSN
QIADRCALRQ AGDLRYLLGL LF
|
|---|
| |