| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3737 |
|---|
| Symbol | |
|---|
| ID | 8532163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4121779 |
|---|
| End bp | 4122642 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Isochorismatase |
|---|
| Protein accession | YP_003261079 |
|---|
| Protein GI | 261822973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.248742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTC CAAACCTTGC TACCTACCTT TTACCCTCAG CCAGCCAGTT GCCAGACAAT
AAAGTCAGTT GGTCGATAGA GCCTGAGCGA GCAGCCCTGC TAATCCACGA TATGCAGGAC
TACTTTTTGA ATTTTTGGGG AGAAAAGAGC GCCCTCACGG CACAACTGGT ACAAAACATT
GTCCGGATAA AAAACGCCTG CCGTGCGCGC GGCATCCCCG TTTACTATAC CGCACAGCCC
AACCAGCAAA GCGATGCCGA TCGCGCGCTG CTCAATGACA TGTGGGGTGC CGGATTAAAC
CGCTATCCCG AGCAGCAAAA GATCACCACC GCCCTGACGC CAGAGGCCGA CGATGTGGTG
CTGGTCAAGT GGCGCTATAG CGCCTTCCAC CGTTCCGATC TGGAACAGCA GTTAAAGAGC
GCCGGGCGCA ACCAGCTCAT TATTTGCGGC ATCTACGCAC ATATTGGCTG CCTGACCACC
GCCAATGATG CATTCATGCG TGATATCAAA CCCTTTATGG TGGCCGATGC GCTAGCCGAT
TTCACGCAGG AGAACCATCT GATGGCGCTG CGTTATACCG CATCTTGCTG TGGCCGCGTA
CTCACCGTCG ATCAATCCAT CAGCGAACTG TCCCCCGCTA CGCAGTACAG TGAATCCCGT
TTGCGCGCGG AATTGCAACC CCTGCTGGAC GAGGACGCGA GCGATATTGA AGGTGATGAT
AACCTGACGG ATTACGGCCT GGATTCGGTG CGAATGATGT CCCTCGTTAC ACGCTGGTGC
AAAGCTGGGT ATAACGTTGA TTTCGTCACA TTAGCTAAAA AACCGACCCT CAATCGCTGG
CTGGAACTGC TCACACCGCA ATAG
|
|---|
| Protein sequence | MSIPNLATYL LPSASQLPDN KVSWSIEPER AALLIHDMQD YFLNFWGEKS ALTAQLVQNI
VRIKNACRAR GIPVYYTAQP NQQSDADRAL LNDMWGAGLN RYPEQQKITT ALTPEADDVV
LVKWRYSAFH RSDLEQQLKS AGRNQLIICG IYAHIGCLTT ANDAFMRDIK PFMVADALAD
FTQENHLMAL RYTASCCGRV LTVDQSISEL SPATQYSESR LRAELQPLLD EDASDIEGDD
NLTDYGLDSV RMMSLVTRWC KAGYNVDFVT LAKKPTLNRW LELLTPQ
|
|---|
| |