Gene Pecwa_3713 details

Gene Information

• Locus tag: Pecwa_3713
• ID: 8532139
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4088687
• End bp: 4089376
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 59%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003261055
• Protein GI: 261822949

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGCTA CAGCCCCTAA ACACGCCCTG ATTACCGGCA GCAGCTCAGG GATCGGTGCC 
GCCATCACAC AAAAATTACT GGCGGAAGGC TGGCGGGTAA CCGGCCTGTC ACGCAAGCCG 
GGTGACTATT CACATCCACA CTTTACCCAC CGCGCGGTGG ATATCATGGA TACGCCCACG 
CTGATTGCCA TTCTGGACGA AATTGTGCAG GTTGATGCCG TCATCCATGC CGCTGGCATA 
ATGAAGGCTG CCCCGCTCGG CCAGCTTTCG CTGGAGGACG GTGAAACGCT GTGGCGATTG 
CATATCAATG CTGCACAGGT GCTTGCCGAT CGACTGGTCG ATAAACTGCC GCAAGGGGGC 
AGGATCGTGC TACTGGGTAG CCGTACCTCT AGCGGTGCCG CAGGGCGCAG CCAGTACGTG 
ACCACAAAAT CCGCGATGAT TGGTATGGCG AGAAGCTGGG CAGCGGAACT GGCACCACGC 
GGTATTACGG TGAACATTGT CGCCCCGGGC GCTACCGAAA CCCCAATGCT GACGATGCCG 
GGTCGCCAGA GCTCTCCGCC GAAGCTACCG CCGATTGGGC GTTTCATTCA GCCGCAGGAA 
GTGGCCGATT TGGTCGGTTA TCTGCTCTCC CCTTCTGCGG CAGCCATTAC TGGCCAGCAG 
TTGGTGATGT GCGGTGGTGC CTCGCTGTAG 

 

Protein sequence

MSATAPKHAL ITGSSSGIGA AITQKLLAEG WRVTGLSRKP GDYSHPHFTH RAVDIMDTPT 
LIAILDEIVQ VDAVIHAAGI MKAAPLGQLS LEDGETLWRL HINAAQVLAD RLVDKLPQGG 
RIVLLGSRTS SGAAGRSQYV TTKSAMIGMA RSWAAELAPR GITVNIVAPG ATETPMLTMP 
GRQSSPPKLP PIGRFIQPQE VADLVGYLLS PSAAAITGQQ LVMCGGASL