Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3706 |
Symbol | pdxA |
ID | 8532132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4080711 |
End bp | 4081691 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase 2 |
Protein accession | YP_003261048 |
Protein GI | 261822942 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000529964 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTAAAA TTATTGCAGT AACGATGGGT GATCCGGCAG GGATTGGACC AGAAATTATT ATCAAATCTC TGGCCGAAGG TGAGCTTTCC GGCGCATCTG CTGTGGTGGT GGGCTGCGTA CAGACGATGC GACGTGTTCT GGCGCTGAAT GTGGTGCCTG CCGTAGAGTT GAAAATCGTT GATAAACCGG CTGACGCCGT ATTCGCACCG GGCGTCATCA ACATCATTGA TGAACCGCTG GAAGATCCAC AAGCGCTGAA GCCGGGTGTC GTTCAGGCAC AAGCGGGCGA TTTAGCTTAC CGCTGCATCA AGAAGGCCAC CGAACTGGCA ATGGCGGGTG AGGTGCATGC GATCGCGACC GCGCCGCTGA ATAAGGAAGC GCTGCACTCG GCGGGCCACC TTTATCCGGG TCACACCGAA CTGCTGGCGA AGCTGACCAA CAGCCGCGAC TATGCGATGG TGCTGTATAC CGATAAGCTG AAGGTTATCC ATGTTTCAAC GCACATTGCG CTGCGCAAAT TCCTCGATAC CCTGAACCGC GATCGCGTGG AAACGGTGAT CGACATGGCA GACGTCTTCC TTAAACGCGT CGGTTTTACC CACCCACGTA TCGCCGTTGC CGGGGTTAAC CCGCATGCGG GTGAGAATGG CTTGTTTGGT GACGAAGAGA TTAAAATTGT CTCGCCATCG GTTGAAGCCA TGAAGGCCAA AGGCATTGAT GTGTATGGTC CGTGCCCGCC GGATACCGTC TATTTGCAGG CGTATGAAGG CCAGTACGAT ATGGTGGTGG CGATGTATCA CGATCAGGGG CACATCCCGC TCAAGCTGTT GGGCTTCTAT GACGGAGTGA ACATCACCGC TGGGTTGCCG TTTATTCGCA CCTCGGCTGA CCACGGTACG GCATTTGACA TTGCCTGGAC GGGTAAAGCG AAGCCTGAAA GCATGGCGAT CTCGATTCAG CTCGCGATGC AACTGGCCTG A
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Protein sequence | MSKIIAVTMG DPAGIGPEII IKSLAEGELS GASAVVVGCV QTMRRVLALN VVPAVELKIV DKPADAVFAP GVINIIDEPL EDPQALKPGV VQAQAGDLAY RCIKKATELA MAGEVHAIAT APLNKEALHS AGHLYPGHTE LLAKLTNSRD YAMVLYTDKL KVIHVSTHIA LRKFLDTLNR DRVETVIDMA DVFLKRVGFT HPRIAVAGVN PHAGENGLFG DEEIKIVSPS VEAMKAKGID VYGPCPPDTV YLQAYEGQYD MVVAMYHDQG HIPLKLLGFY DGVNITAGLP FIRTSADHGT AFDIAWTGKA KPESMAISIQ LAMQLA
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