Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3702 |
Symbol | |
ID | 8532128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4074733 |
End bp | 4075491 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003261044 |
Protein GI | 261822938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.8457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATCA TCCAATCGGT GGAACGTGCG TTACGTATTC TGGATCTCTT CGATGAGTAT AATGTTGAGA TCAAGATTAC TGATATCAGC ACGCAAATAG GGTTACACAA AAGTACCCTG CATTCCCTGT TGAAAACGCT TCAGGTTGCT GGCTATATCG ACCAAAACAA AGAGAACGGT AAATACCGAC TGGGTATGAA ACTGGTTGAG CGCGGCAATT TAGTGGTGAA CTCCATTGAT ATTCGTGACA AAGCCCGTAG CTATCTGCTC GATCTGGCGT CACAAACCGG CCAAACCACG CATTTGGCGA TCCTTGATGG CAAAGAAGCC GTGTACATCG ATAAAGTGGA AGGGAAACTG GCGGTCATTA CGTTTTCCCG CATCGGTCGC CGTTTGCCGA TTCACGCGAC GGCAATAGGC AAAGTACTGA TGGCCTTCAC TCCAGAAGAA GAGGTCAATA CGCTCTTGCA GGGTTATGAT TTTACTCGAC AAACCCCGAA TACCCTTGTC GATCGGGAAA CATTCCTGAA AGAGCTGGAG TTTGTGCGTC AACATGGCTA TGCCCTGGAT AATCAGGAAA ATGAGCAAGG CGTTCGCTGT ATTTCTGTCC CTATCTGGAA CCACGCTCGC CGTATCATCG CCGCCATCAG TATGTCCACG TTGACCAATC GCGTATCAGA CAACGACATC AACGAGTACA TTTTGTTGCT GAAAGATGCC TCAAAAGCCC TATCGCAACG GCTCGGCTAC GAAGGCTGA
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Protein sequence | MPIIQSVERA LRILDLFDEY NVEIKITDIS TQIGLHKSTL HSLLKTLQVA GYIDQNKENG KYRLGMKLVE RGNLVVNSID IRDKARSYLL DLASQTGQTT HLAILDGKEA VYIDKVEGKL AVITFSRIGR RLPIHATAIG KVLMAFTPEE EVNTLLQGYD FTRQTPNTLV DRETFLKELE FVRQHGYALD NQENEQGVRC ISVPIWNHAR RIIAAISMST LTNRVSDNDI NEYILLLKDA SKALSQRLGY EG
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