| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3692 |
|---|
| Symbol | |
|---|
| ID | 8532118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4065657 |
|---|
| End bp | 4066799 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003261034 |
|---|
| Protein GI | 261822928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.020193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGA TTCCACAACA GCCCGTTTAT ACCCGTAACC TGTCCTGCGG CACACTGAGT
GTGACGCCAA CTGGCGGCAT AGCGGCGCTG GATACCTTGT TTGATATTGC TGAACGCCGT
AACCCTAAGC GGGCTTTCCT GTTTGTTAGC AAAGTATTAG GACGACACAT TCCCGTTCCT
CCCTCGACGA TGCGCGGTGT GTATCGCCAG CTTGCCGAGC AGATCCCCGC CTCTATCGAG
GGGCCGGTGC TGTTTATCGG CATGGCCGAA ACGGCGGTAG GTTTAGGGGC AGGCGTTTTT
GACGAGGTGA GGCAACGGGT CAGTGAGCCA GTTTATTTGA CCTCCACCCG TCACCCGCAA
GACGCTGAAC TGCTCTGTGA ATTTAAGGAG GCGCATAGTC ACGCCACCGA TCACTTAATC
TATCTCCCAG AGGATGAACA GTTGCGTCGT CGCGTGCGTG AAGCACGTAC TCTGATACTG
ATTGATGATG AAGCGACGAC GGGCAATACG TTCATTAATT TACTGGCCGC CCTGCGAGAA
ACCACATGGC TTACGCACTT GCAGCAGGTG TTTGCTGTAA CGCTAACCGA CTGGAGCGGT
AGTGCGCTCG CACAGCGTTG TCCTTTACCT CTTCAGTCCC TCTCTCTGGT TCAGGGCGAC
TGGCAATGGG TGCCCAAGCC CGATGCCCCC CTTCCAATCA TGCCGACAGT GAATGTTACG
GCGCGCGGTA ACGTCGCTAT CACGGGAAAA CAGAGCTGGG GACGCTTGGG CATGGCCGAA
CCTGCGGGGG ATTTAGGGCG TGATTTGCGT GTAGCGCCGA GTGAAAAAAT ATTGGTTCTG
GGCAGTAGTG AGTTTGTTTG GGAACCTTTT TTACTGGCGG AGCATTTGCA AGCCCAGGGG
GCTGACGTTA AGTTCAGCTC CACCACACGA TCCCCTATCG CAACCGGGTT CGCGATCCAG
TCGGCGATAA CATTCAATGA CAATTACGGG CTAGGCATTG CAAATTTTGT CTACAACGTT
ATGCATCAAC GTTTCGATCG CATTTTGCTC TGCGTGGAGA CGCCGCCAGA GAGTGTCGAT
CCTCAATTAC TCGATGCGCT GGCGACGGTA GCGGCCAGCG TGGAGATTAT CAGCTATGAC
TAA
|
|---|
| Protein sequence | MSLIPQQPVY TRNLSCGTLS VTPTGGIAAL DTLFDIAERR NPKRAFLFVS KVLGRHIPVP
PSTMRGVYRQ LAEQIPASIE GPVLFIGMAE TAVGLGAGVF DEVRQRVSEP VYLTSTRHPQ
DAELLCEFKE AHSHATDHLI YLPEDEQLRR RVREARTLIL IDDEATTGNT FINLLAALRE
TTWLTHLQQV FAVTLTDWSG SALAQRCPLP LQSLSLVQGD WQWVPKPDAP LPIMPTVNVT
ARGNVAITGK QSWGRLGMAE PAGDLGRDLR VAPSEKILVL GSSEFVWEPF LLAEHLQAQG
ADVKFSSTTR SPIATGFAIQ SAITFNDNYG LGIANFVYNV MHQRFDRILL CVETPPESVD
PQLLDALATV AASVEIISYD
|
|---|
| |