Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3681 |
Symbol | |
ID | 8532107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4054537 |
End bp | 4055415 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | periplasmic solute binding protein |
Protein accession | YP_003261023 |
Protein GI | 261822917 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT CACTATTAGC TATCGCGTTA TCCGGCCTGC TGCTTAGCCC ACTGGCGATG GCAAAGAACC TTGATGTTGT TGCCAGCTTT TCCGTACTTG GCGATATGGT CAGCCACATT GGCGGCGATC GCGTTACCGT GACCGACCTG GTGAAACCGA ATGGCGATCC ACATGAGTTT GAACCGTCAC CAAAAGACAG CAAAACGTTG GCTAGCGCCG ATCTGGTTTT CGTTAACGGT CTGGGGCTGG AAGGCTGGCT CGATCGTCTG GTCACCGCAT CTGGCTATCA TGGCGATGTT ATTACCGCCT CCAACGGGAT TGAAACACGC TCAATGGTGG AAGACGGCAA AACGGAAACC GATCCACATG CCTGGAACAG CATGAGCAAC GGCGTGATCT ATGCGCACAA CATCGTCAAC GCGCTGGCAA AAGCCGATCC TGCCAATGCC GATTACTATC GCCAGCAGGG CGAAGCCTAC ATCACGCAGC TACAGGAGCT GGATCGTTAC GCGAAGAAAA CCTTTGCCGC TATTTCGCCA GAAAAACGCA AGGTGTTGAC CAGCCATGAC GCATTTGGCT ACTTCAGCCA GGCCTACGGC GTGAAGTTCC TGTCGCCAGT GGGCTACTCT ACCGAATCTG AAGCCAGCAG CAAAAAAGTG GCCTCGCTGA TTAAGCAGAT CAAGCAAGAG AAGGTGAAAA GCTACTTCAT TGAGAACCAG ACCGATGGAC GTCTGGTGAA GCAAATCGCC AATGCCAGCG GCGCGCAGCC CGGCGGTGAA CTGTACCCGG AAGCCCTGAC CGATGCATCC GGCCCGGCAG CGACCTATAC GACCGCGTTT AAGCACAACG TTGATACCCT CGCCGCCAGC ATGAAGTAA
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Protein sequence | MKRSLLAIAL SGLLLSPLAM AKNLDVVASF SVLGDMVSHI GGDRVTVTDL VKPNGDPHEF EPSPKDSKTL ASADLVFVNG LGLEGWLDRL VTASGYHGDV ITASNGIETR SMVEDGKTET DPHAWNSMSN GVIYAHNIVN ALAKADPANA DYYRQQGEAY ITQLQELDRY AKKTFAAISP EKRKVLTSHD AFGYFSQAYG VKFLSPVGYS TESEASSKKV ASLIKQIKQE KVKSYFIENQ TDGRLVKQIA NASGAQPGGE LYPEALTDAS GPAATYTTAF KHNVDTLAAS MK
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