| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3678 |
|---|
| Symbol | |
|---|
| ID | 8532104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4050684 |
|---|
| End bp | 4052507 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_003261020 |
|---|
| Protein GI | 261822914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAC TCACTCGCAG AACTTTCGTC AAGCTCGGCG CAGGCAGCGC CATTACGCTG
GCTGGCGGCT TTTTTCATGC TAACGCCGAC ACGACCGCGC CCGCCGGGCC GCTGCGCATT
GCCATTATTT CGGATGTCCA CGTCCACAAT ATCTACGGCA ACTACGATTT TGACGGCCTG
CCCGATGCGC AGACCGGAAA GAAGCTGACC ATTCGCACCC TGAAAGATTC GGTGAATTCG
ACCCGCATCT TCAACGAGCC CTACTTTGCG CTGCTGGCTG CGCTGGACGA ACTGGCAAAA
CAGCAGGTGA AATACGTAGT GCTGTCCGGC GATTATTCTG ATGACGGCCA ACAACCTACC
GTTGAAGGCA TCGCCGCCAT CCTGACGCAG TACGAACAGC GTCACGGGAT GCGCTTCTTC
GCCACACCGG GCAACCATGA TGTCAACCGT CCACAAGGGG ATGACTCGTG GGAAAGAATG
CTCAACGCCG ACGGCACCAG CACGCTGCTG AGCAGTAAAC CCGGCGTTAA ACTGGGCGGC
GCACAATCGC TAATCGTTAC AGCCAAGATG CAGGCACTCG GCTATGAACG CGGCCTGCCG
CTGATGAAAC CGTTTGGTTT CTTTAAACGC GATGACTTCC TGCACTGGGA AACGCCGTTT
GGCGACAGCG ACGAACTCAA TAAACGTCAG TATCTCGCCC GTTCACCGGA TGGTAGCAAA
CAGTGGAACA TCGTCGATGC CTCCTATTTG GTGGAGCCGG AAGCGGGGCT GTGGCTACTT
TCCATCGATG CCAACGTGTA TCAGGTCAAA GACGGCCCGG AGAAACGTGA AGGGATTGAA
GGCTACTCCA CCAGCAGTAA CACGGGCTGG AATGCCTTGC TGATCGAGAA ACCGTTCATG
CTGCCGTGGG TGAAATCGGT GGTACAGCGG GCGAAAGCGC AGAATAAGAA GCTGCTGGTG
TTCTCGCACT ATCCGCTGGT CGATTTCCTC GACGGCACGG TAGAGGATGA AAAACAACTG
TTTGGCAGCA ACAGCTTCAT CAAGCGTACG CCGAAGCCAG AGGTTGCCGA ACAGGCACTG
GCGGCAGGCA TCCGTCTGCA TTTCAGCGGT CATCTGCACG TCAACGACAC GGGCGTGTAT
CGCGGTTCAC AGGGGACGCT GGTGAATGTG GCGGTGCCGT CACTGGCCGC CTACCCACCT
GCGATGAAGC TGGCGACGCT GCATAATGAC CGAGTCGATA TTGATACGCT GGTCCTACGC
AACGTGCCGC AGTTCAACCA TCTGTTCCCG TTTTATCAGA AAGAACTGGA TCGCACTGGC
GAACCGCTGG GTGACATACT GAAAAGCCGC GATTATTACG ACTTCCTGCA CCACCATCTG
GCGCTGCTGG TACGCCAGCG TTTTCTGGTA AAAGACTGGC CGGAGGATCT ATCTCCTCTC
ATCAACACGC TGAACTGTGC CGATCTGCTG TGGATTGCGC AGCAAAAAGA GCCGATCAGC
GCCAACGCGT TGCCTGATGC CGACCAGCGT AAACCGAGCG CGGTAGCAGG CACCGATGGG
TTACAGGATA TTTCTCTGCT CACGCTGGTG ACCGACTGGT ATTGCCTGCG CAACGGCAGC
GATCTCGCCT GGCAAGATAT TCCGGCAGCG CGAGTGAAAC AGTATCGCGC ACTGCTCGCA
GCCTACACGC CGACGACCAC GCTACCGCCG GACAGCCTGC AACACCGCTT CGGCCTGATG
CTGAAAATCC TCGCGGGATA TATCAACGAT GAGCCAGCGA CTCGCTTTGT GGTTGATATG
CAGGGGAATT TATCAGCGGT GTAA
|
|---|
| Protein sequence | MTSLTRRTFV KLGAGSAITL AGGFFHANAD TTAPAGPLRI AIISDVHVHN IYGNYDFDGL
PDAQTGKKLT IRTLKDSVNS TRIFNEPYFA LLAALDELAK QQVKYVVLSG DYSDDGQQPT
VEGIAAILTQ YEQRHGMRFF ATPGNHDVNR PQGDDSWERM LNADGTSTLL SSKPGVKLGG
AQSLIVTAKM QALGYERGLP LMKPFGFFKR DDFLHWETPF GDSDELNKRQ YLARSPDGSK
QWNIVDASYL VEPEAGLWLL SIDANVYQVK DGPEKREGIE GYSTSSNTGW NALLIEKPFM
LPWVKSVVQR AKAQNKKLLV FSHYPLVDFL DGTVEDEKQL FGSNSFIKRT PKPEVAEQAL
AAGIRLHFSG HLHVNDTGVY RGSQGTLVNV AVPSLAAYPP AMKLATLHND RVDIDTLVLR
NVPQFNHLFP FYQKELDRTG EPLGDILKSR DYYDFLHHHL ALLVRQRFLV KDWPEDLSPL
INTLNCADLL WIAQQKEPIS ANALPDADQR KPSAVAGTDG LQDISLLTLV TDWYCLRNGS
DLAWQDIPAA RVKQYRALLA AYTPTTTLPP DSLQHRFGLM LKILAGYIND EPATRFVVDM
QGNLSAV
|
|---|
| |