| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3644 |
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| Symbol | |
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| ID | 8532070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4014133 |
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| End bp | 4014612 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003260986 |
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| Protein GI | 261822880 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.272221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATT TGATTTATGC CAGCATTAAT GGTCAAAAAC AGGGTTTAAT ATCATCCGGT
TGCTCAACGC TTGACTCAAT TGGCAATCGC TACCAAACTG GTCATGAAGA TCAAATACAA
GTATTAGGCT TAAACCACAG TATCAGCCGC GATCAAAATG TTGCCCATCA CCCAATTAAT
TTTGTTAAGC CAATCGACAA ATCGTCCCCA TTATTAGGGA TGGCAATCTC TTATAATGAA
AAGGTGGATG TCACATTTTA TTTTTACCGC GTCAATTCCG CAGGGCAATT AGAACTTTAT
TATGAAGTTA CATTAACGGA TGCGAACATT GTCGATGTCA CCTGTGTCTA TCCGCACGTC
ATCGATAACA ATGAAATCAT GCCGTATGAA AAAGTCCAGC TAAAATACAA AACCATCGCA
TGGAACCATA AGATTGCAGG AACATCGGGT TACAGTATCT GGGAGGAAAT GAGCCTCTAG
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| Protein sequence | MANLIYASIN GQKQGLISSG CSTLDSIGNR YQTGHEDQIQ VLGLNHSISR DQNVAHHPIN
FVKPIDKSSP LLGMAISYNE KVDVTFYFYR VNSAGQLELY YEVTLTDANI VDVTCVYPHV
IDNNEIMPYE KVQLKYKTIA WNHKIAGTSG YSIWEEMSL
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