Gene Pecwa_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3616 
Symbol 
ID8532042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp3981801 
End bp3983024 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content58% 
IMG OID 
Productlysophospholipid transporter LplT 
Protein accessionYP_003260959 
Protein GI261822853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAC AGACTGAACC CGCGACGCCT TTGCTGTCGC GCAGTATGAG CGCGGTGATT 
ATCGCGCAGT TCTTCTCCGC GTTTGGTGAT AATGCACTGC TGTTTGCCAC GTTAGCACTA
ATCAAACAAT TGCTGTATCC CGACTGGAGC CAGCCGTTTT TGCAGATGGG GTTTGTGGCG
GCGTACATCA TTCTGGCTCC GTTTGTCGGG CAAATAGCGG ATAGCTTCGC CAAAGGACGG
GTGATGATGT TTGCCAATAC CCTGAAGCTG GCGGGGGCAC TGCTGATTTG CGTGGGCGGC
AATCCGTTTA TAGGCTACAC GCTGGTCGGT ATTGGTGCCG CTGCGTATTC ACCTGCGAAA
TACGGCATTC TGGGTGAGAT CACACGCGGC GATCAGTTGG TCAAGGCTAA TGGGTTGATG
GAAGCGTCGA CCATTGCGGC GATCCTGACC GGCTCCGTAG CAGGCGGCGT GCTGGCGGAC
TGGAATATTT ACGCTGCGCT GTCGATTTGT GCGGTGGCTT ACGGCGTGGC GCTGGGGGCG
AATATGCTGA TCCCGCATCT TAATGCCGCC CGACCGGGGC AGCCGTGGCA CCCGGTGCAG
ATGGCGAGCA GTTTCTTTTC TGCCTGTCGG GTTCTGTGGC GTGATGGCGA TGCCCGGCTT
TCTCTGATTG GCACCAGTAT GTTCTGGGGC GCGGGCGTAA CGCTGCGTTT TCTGCTGGTA
CTGTGGGTGC CGCACGCGCT TGGGATTACC GATAACGCGA CGCCGACGCT GCTTAATGCG
ATGGTTGCCG TTGGGATTGT TCTGGGGGCT GGTGGTGCTG CCAGACTGGT TACGCTCGAT
AACGTGCGGC GCTGCCTGCC TGCGGGGTTC TTGATCGGCG TAGTGGTGGT GATTTTCACG
CTTCAGCACA ACCTTATTAG TGCCTATTCT CTACTAATTC TGCTGGGGGC GCTTGGCGGG
TTCTTCATTG TGCCGCTCAA TGCGCTGTTA CAGGAGCGTG GGAAGGCCAG CGTCGGTGCG
GGAAATGCGA TCGCGGTACA GAATCTGGGT GAGAACGGCG CTATGCTGCT AATGCTGGGG
CTCTATTCTC TGGTGGTGAA ACTGGGTGTT TCGGTTATCG CAATCGGGGT AGGCTTTGGT
GTCTTGTTCG CGCTGGCGAT TGCGTTGCTG TGTACATGGC TGATCCTGAC TAAACGCCGC
GCACGTTCCG CCGGTGCGGA ATAG
 
Protein sequence
MSQQTEPATP LLSRSMSAVI IAQFFSAFGD NALLFATLAL IKQLLYPDWS QPFLQMGFVA 
AYIILAPFVG QIADSFAKGR VMMFANTLKL AGALLICVGG NPFIGYTLVG IGAAAYSPAK
YGILGEITRG DQLVKANGLM EASTIAAILT GSVAGGVLAD WNIYAALSIC AVAYGVALGA
NMLIPHLNAA RPGQPWHPVQ MASSFFSACR VLWRDGDARL SLIGTSMFWG AGVTLRFLLV
LWVPHALGIT DNATPTLLNA MVAVGIVLGA GGAARLVTLD NVRRCLPAGF LIGVVVVIFT
LQHNLISAYS LLILLGALGG FFIVPLNALL QERGKASVGA GNAIAVQNLG ENGAMLLMLG
LYSLVVKLGV SVIAIGVGFG VLFALAIALL CTWLILTKRR ARSAGAE