| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3602 |
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| Symbol | |
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| ID | 8532028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3967556 |
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| End bp | 3970012 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | exoribonuclease R |
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| Protein accession | YP_003260945 |
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| Protein GI | 261822839 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAG ATCCATTCCT GGAACGAGAA GCAGAAAAAT ACGAATCCCC TATCCCTAGC
CGTGAATATA TTTTGGCGCA CATCGCCAAG CGCGATACCC CGATCGGTCG GGAAGAATTG
GCCGCCGACC TGCAATTAAC CGGAGAAGAA GCCCTCGAAG CGCTGCGCCG CCGTCTGCGT
GCAATGGAGC GCGATGGCCA GCTTATTTTT ACCCGCCGCC AATGCTATGC GTTGCCGGAA
AAGCTCGATC TACTGCGTGG TACGGTCATC GGTCACCGCG ATGGCTTCGG TTTCCTGCGT
GTGGAAGGCC GCAAAGACGA TCTTTACCTG TCGGCTGAAG AGATGAAACG GGCAATTCAC
GGCGATGTTG TGCTGGCGCA ACCGCTGGGT GCCGATCGTA AAGGACGCCG CGAAGGGCGT
ATTGTACGTG TGCTAGAACC GCGTACCGGA CAAATTGTCG GCCGCTATTT TGTCGATGCT
GGTATCGGGT TCGTCGTACC GGATGATAGC CGCCTGAGCT TTGATATTCT GATCCCGAAA
GAAGAAATTA ACGGCGCTCG CATGGGCTTC GTGGTTGTCG TTGAGCTGAC ACAACGCGCC
ACGCGCCGCA CGAAAGCGGT CGGTAAGATC GTTGAGATCC TCGGTGACAA CATGGGCACC
GGGCTGGCAG TGGATATTGC CCTGCGTACC CACGATATTC CGCACACCTG GCCGCCTAAA
GTCGAAGAAC AGGTGAAGGA TCTTTCCGAA GAGGTGCCGG AAGCCGCGAA GAAAGGCCGT
GTGGATCTGC GTAAGCTGCC GCTGGTCACG ATTGATGGCG AAGATGCCCG CGATTTTGAT
GATGCCGTAT ACTGTGAACA GAAACGCGGT GGTGGCTGGC GCTTGTGGGT CGCGATTGCG
GACGTGAGCT ACTACGTGCG GCCGAATACG GCGCTTGACC ATGAAGCGCG GGCGCGTGGC
ACATCGGTGT ACTTCCCGTC GCAGGTGGTA CCGATGCTGC CGGAAGTGCT GTCGAACGGG
CTGTGTTCGC TTAATCCGCA GGTTGATCGC CTGTGTATGG TCTGTGAAAT GACCGTCTCG
GCACAGGGTA AGCTGTCGTC CTACAAATTC TATGAAGCGG TGATGAGTTC ACACGCGCGT
CTGACCTACA CCAAAGTCTG GAACATTCTG CAAGGCGATG CCGAACTGCG TGAGCACTAC
AAGCCTTTGG TCGGCGGGCT GGAAGAGCTA CATCACATGT ATAAAGCGTT GGAACACGCG
CGTGAAGTAC GTGGTGGCAT CGCGTTTGAA ACCGAGGAAG CGAAGTTTAT TTTCAACGCC
GAACGCCGTA TCGATCGTGT GGAAGCCGTG GTGCGTAATG ACGCGCACAA GCTGATCGAA
GAGTGCATGA TTCTGGCGAA CATCTCCGCT GCAAGATTTG TGGAGAAAAA CGAAGAGCCT
GCGTTGTTCC GCGTACACGA TCAGCCGAGC GAAGACCATG TCTTAGCCTT GCGCAGCGTG
CTGGGTGAAT TGGGGCTTAC GCTGAAAGGC GGAATGAAGC CACAGCCGAA AGACTACGCG
GAATTAATGA ACGAGGTGGC GGAGCGTCCC GATCGGGAAA TGCTGCAAAC CATGCTGCTG
CGTTCAATGA AACAGGCGAT TTATGATCCG GAAAACCGCG GTCACTTCGG GCTGGCCTTG
ACGTCTTACG GCCACTTCAC GTCGCCAATT CGTCGTTATC CTGATCTGTC GTTGCACCGT
GCGATTAAGT ATCTGTTGAG CGATCGTCAT GAGCGTTGGA CGTCAACGGG CGGTTGGCAT
AGCGATATTA ACGAGATGCT ACAGTTGGGT ATGCACTGCT CGATGACGGA GCGCCGTGCG
GATGAAGCCA CTCGCGACGT TGCGGACTGG CTGAAATGCG ATTTTATGCA GGACCATGTG
GGCGAAGTCT TTACGGGGAT TATCGCCAGC GTGACCGGTT TTGGCTTCTT CGTGCGCCTG
AAAGATCTGT TTATCGATGG GCTGGTACAC GTTTCTACGC TGGATAATGA CTACTACCGT
TACGATAATA TCGGTCAGCG ACTGATCGGC GAATCGCGCG GGCAGGTTTA TCGGCTGGGT
GATGAAGTAG AAATCCGTGT TGAAGCCGTG CATATGGACG AGCGCAACAT TGATTTCGCG
TTGATTTCCA GTACTCGCAA GGTGCGCGGC GAAGGGAAAA CCGCCCGTGA TCGGACGAAG
AAACCGGAGT CTCGTGAGGC GAAGCCAAGT CGACGCCGTC GTAGCCCAAG CAAGGCCGCC
GCAAATTTTG AACCAGATGC GGCATTCCGC AAAGAAGGCG ATCGCAGCGC GACGACGGAT
AAACCAAAAG TGAAGCCGAA GAAGAACCGC GATAAAGCGA AAAAGAACGC AGAAAAAACG
CGTAAAATTG CCGCCGCGAC CAAGGCTAAA CGCGCGAAGA AAAAGTCTGC GGAGTAA
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| Protein sequence | MSQDPFLERE AEKYESPIPS REYILAHIAK RDTPIGREEL AADLQLTGEE ALEALRRRLR
AMERDGQLIF TRRQCYALPE KLDLLRGTVI GHRDGFGFLR VEGRKDDLYL SAEEMKRAIH
GDVVLAQPLG ADRKGRREGR IVRVLEPRTG QIVGRYFVDA GIGFVVPDDS RLSFDILIPK
EEINGARMGF VVVVELTQRA TRRTKAVGKI VEILGDNMGT GLAVDIALRT HDIPHTWPPK
VEEQVKDLSE EVPEAAKKGR VDLRKLPLVT IDGEDARDFD DAVYCEQKRG GGWRLWVAIA
DVSYYVRPNT ALDHEARARG TSVYFPSQVV PMLPEVLSNG LCSLNPQVDR LCMVCEMTVS
AQGKLSSYKF YEAVMSSHAR LTYTKVWNIL QGDAELREHY KPLVGGLEEL HHMYKALEHA
REVRGGIAFE TEEAKFIFNA ERRIDRVEAV VRNDAHKLIE ECMILANISA ARFVEKNEEP
ALFRVHDQPS EDHVLALRSV LGELGLTLKG GMKPQPKDYA ELMNEVAERP DREMLQTMLL
RSMKQAIYDP ENRGHFGLAL TSYGHFTSPI RRYPDLSLHR AIKYLLSDRH ERWTSTGGWH
SDINEMLQLG MHCSMTERRA DEATRDVADW LKCDFMQDHV GEVFTGIIAS VTGFGFFVRL
KDLFIDGLVH VSTLDNDYYR YDNIGQRLIG ESRGQVYRLG DEVEIRVEAV HMDERNIDFA
LISSTRKVRG EGKTARDRTK KPESREAKPS RRRRSPSKAA ANFEPDAAFR KEGDRSATTD
KPKVKPKKNR DKAKKNAEKT RKIAAATKAK RAKKKSAE
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