| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3583 |
|---|
| Symbol | |
|---|
| ID | 8532009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3954051 |
|---|
| End bp | 3954473 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2502 |
|---|
| Protein accession | YP_003260926 |
|---|
| Protein GI | 261822820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000921365 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAGC CACTCGTTAT CAGCGCCCTG TTTGTGGGAA TGTTTGCGGT TATGCCAGCG
CCAGAGGCTA AGGGGGCCAG CATCGATCTG ATGCCCGGCG TCACGTTGAA TATCGGCGAG
CGTGACAGAC GTGGTAACTA CTGGGATGGC TATGATTGGC GCAGCGAGCG CTGGTGGCAG
GAGCACCGGG GTTACTACCG TGGTGAGCGT AATCGGCACG GTTACTACTG GGATGGTTGG
CGCTGGCGTG ATGCCCGCTG GTGGCGTGAG AGCCAGCACG ACAGACGCGG TTATGACAAT
CGACGCTTTG ATCCACCGCG CTATGTTGAC GAGCGGGGTC CGCGTCGTGG TGATTGGGAC
AGGCGCGGGC ATGAGCGAGG AAATGGCTAT TACCGCAATG GGCGAGGGTC GTTCCGCGAT
TAG
|
|---|
| Protein sequence | MFKPLVISAL FVGMFAVMPA PEAKGASIDL MPGVTLNIGE RDRRGNYWDG YDWRSERWWQ
EHRGYYRGER NRHGYYWDGW RWRDARWWRE SQHDRRGYDN RRFDPPRYVD ERGPRRGDWD
RRGHERGNGY YRNGRGSFRD
|
|---|
| |