Gene Pecwa_3581 details

Gene Information

• Locus tag: Pecwa_3581
• Symbol: cpdB
• ID: 8532007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3951304
• End bp: 3953256
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 53%
• Product: bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein
• Protein accession: YP_003260924
• Protein GI: 261822818

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0441255
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCATT CACTGGCACT CAGCCTACTT GCTACGCTGG TCGCCACGAC CGTTCATGCC 
GCTACCGTTG ATTTACGGGT ATTGGAAACT ACCGATCTGC ACAGCAATAT GATGGATTTC 
GATTACTACA AGGATACGCC AACCGATAAA TTTGGTCTGG TGCGTACCGC CAGCCTGATT 
CACGCCGCGC GCGACCAGGC CACTAACAGC GTGCTGGTTG ATAATGGCGA CCTGATTCAG 
GGCAGCCCGC TAGGCGACTA CATGGCGGCG AAGGGGCTGA AAGCAGGCGA TGTACACCCG 
GTTTATCAGG CGATGAACAC GCTGGATTAT TCCGTCGGCA ATATCGGTAA CCACGAATTC 
AACTATGGCT TGGACTACCT GCACAAAGCG CTGTCAGGCG CGACATTTCC TTATGTGAAC 
GCCAACGTGC TGGATGCAAA AACGGGTAAG CCGCTGTTTA CGCCATATCA TATTGAAAAC 
AAATCGGTTA AAGATCGCGA TGGCAAACAG CATACGCTGC GCATCGGCTA TATTGGCTTC 
GTCCCGCCGC AGGTCATGGT GTGGGATAAA GCCAATCTGA CAGGCAAAGT CACCGTAGAA 
GACATCACGG AAAGTGCCAA AAAATGGGTG CCAGAAATGC GTAAGCAAGG TGCCGATCTG 
GTGATCGTTA TCCCTCATTC CGGCCTGTCT GCCGAGCCAT ATAAAGCCAT GGCAGAAAAC 
TCCGTTTACT ACCTCAGCCA AATTCCTGGG GTTGATGCCA TCATGTTTGG CCATGCTCAC 
GCGGTTTTCC CCAGCAGTGA CTTTGCCAAT ATCAAAGGCG CGGATATCAA ACAGGGAACG 
CTTAACGGCG TGCCTGCCGT AATGCCGGGA CAATGGGGTG ACCACCTCGG CGTTGTCGAT 
TTCACGCTGA ATAACGACAG CGGCACCTGG AAGGTGGAAA AAGCAAAAGC AGAAGCCAGA 
CCGATCTATG ACAAAGCGCA GAAGAAATCA CTGGCAGCGG AAGACGACAA GCTGGTGAAA 
GTGCTCTCCG ATGCGCATAA AGATACGCGT GAGTTCGTCA GCAAACCCAT CGGCAAATCC 
GCAGACAACA TGTACAGCTA TCTGTCGCTG GTTCAGGACG ATCCGACCGT GCAGATCGTC 
AACAATGCCC AGCGCGCCTA CGTAGAACAC TTTATTCAGG GTGATCCCGA TCTGGCCGAT 
CTGCCGGTAC TTTCCGCCGC CGCACCGTTT AAAGCCGGCG GACGTAAAAA CGATCCAGCC 
AGCTATGTCG AAGTAGAAAA AGGCCAGCTC ACCTTCCGTA ACGCTGCCGA CTTGTATCTC 
TACCCGAATA CGCTGGTGGT GGTGAAAGTC AACGGACAGC AGGTGCAAGA ATGGCTGGAG 
TGCTCTGCGG GGCAGTTCAA ACAAATCGAT CCGAACAAGC GTGAACCGCA ATCTCTACTC 
AACTGGGACG GCTTTCGCAC GTATAACTTC GACGTGATCG ATGGCGTCAA TTATCAGATT 
GATGTCACGC AGCCTGCCCG CTATGACAGC GAGTGCACGT TAATCAACGA GAAATCTCAC 
CGTATCAACG CGCTGACGTT TAACGGCAAA CCGATCGATC CCAAAGCAAC CTTCCTGATC 
GCCACCAATA ACTATCGCGC TTATGGTGAG AAATTTGCCG GTACGGGTGA GAAATCTGTG 
GCCTTTGCAT CGCCGGATGA AAACCGTTCC GTACTCGCGG CTTACATCAG TGCGGAAACG 
CAAAAGTCGG GAGAAGTGAA GCCACAGGCG GATAACAACT GGCGCCTGGC GCCTATCGTC 
AGCGATACGC CGCTGGATAT CCGTTTTGAA ACGTCACCGT CAGAGAAGGC CGCCGCGTTT 
ATCAAAGAGA AAGCACAGTA CCCGATGACG TCCGTCGGGA ATGATGAGAC GGGCTTTGCG 
GTTTATCGTA TTGATCTGCA ACACGCGAAA TAA 

 

Protein sequence

MKHSLALSLL ATLVATTVHA ATVDLRVLET TDLHSNMMDF DYYKDTPTDK FGLVRTASLI 
HAARDQATNS VLVDNGDLIQ GSPLGDYMAA KGLKAGDVHP VYQAMNTLDY SVGNIGNHEF 
NYGLDYLHKA LSGATFPYVN ANVLDAKTGK PLFTPYHIEN KSVKDRDGKQ HTLRIGYIGF 
VPPQVMVWDK ANLTGKVTVE DITESAKKWV PEMRKQGADL VIVIPHSGLS AEPYKAMAEN 
SVYYLSQIPG VDAIMFGHAH AVFPSSDFAN IKGADIKQGT LNGVPAVMPG QWGDHLGVVD 
FTLNNDSGTW KVEKAKAEAR PIYDKAQKKS LAAEDDKLVK VLSDAHKDTR EFVSKPIGKS 
ADNMYSYLSL VQDDPTVQIV NNAQRAYVEH FIQGDPDLAD LPVLSAAAPF KAGGRKNDPA 
SYVEVEKGQL TFRNAADLYL YPNTLVVVKV NGQQVQEWLE CSAGQFKQID PNKREPQSLL 
NWDGFRTYNF DVIDGVNYQI DVTQPARYDS ECTLINEKSH RINALTFNGK PIDPKATFLI 
ATNNYRAYGE KFAGTGEKSV AFASPDENRS VLAAYISAET QKSGEVKPQA DNNWRLAPIV 
SDTPLDIRFE TSPSEKAAAF IKEKAQYPMT SVGNDETGFA VYRIDLQHAK