Gene Pecwa_3544 details

Gene Information

• Locus tag: Pecwa_3544
• ID: 8531970
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3898004
• End bp: 3900187
• Gene Length: 2184 bp
• Protein Length: 727 aa
• Translation table: 11
• GC content: 53%
• Product: TonB-dependent siderophore receptor
• Protein accession: YP_003260887
• Protein GI: 261822781

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCCC GAAAAAATAA TAGAAAAAAA GCACAGTGGT TATTGCCAGT ATTAATGGTG 
GTTGTTCCAC CCGTATTGAG CGCCGAACCG ACAACCAGCA AGGACAGTGA AAAGACAAAA 
TCGGCTGACG TTATGGTCGT CAAGGCAGAG CGCAGCGAGG CGAATGCGAA TCTGGCTGGT 
GCCGGTATGG CGACCGATAA TGTGGATCTC GGGCCATTAG GCAAACGTGC AAGGCTGGAT 
ACGCCGTATT CGACCACGAC CGTGACGGAA GCCATGGTTA ACAATCAGCA GGCAAAAAAT 
GTTAACGATC TCCTGAAATA TAATGCGTCC AGCCAGATGC AGGCGCGCGG CGGTATTGAC 
GTGGGTCGTC CGCAAAGCCG TGGCATGCAA GGGAGCGTGC TGGCAAATAG CCGGTTGGAT 
GGGTTAAACA TTATTTCCAC CACCGCTTTT CCGGTAGAAA TGCTGGAGCG ACTGGATGTG 
ATTAACAGCC TGACTGGCGC GCTGTATGGG CCTGCCAGCC CAGCCGGACA GTTTAACTTC 
ACGCAGAAAA GGCCAACGGC GCAGACGTTA AACCGTTTTA CCGTCGGCTA TTCCGGTAAA 
GGTGCGGCGA TGGGGCACGC CGATCTGGGT GGGCATCTGG GAGACGAAAA CCAGTTCGGT 
TATCGTATCA ACCTGCTACA GGATGAAGGT GAAGGAAGTA TCAGCAACAG CACGTTGAGG 
CGGCAATTGG CCAGCGTAGC GTTTGACTGG AACCTCTCGC CCGATACAGT GTTGGAAGTC 
AACGCCAGCG AATACCGTTT CCGAAAAATG GGTTATGCGG GTGATTTTGC CTATGATCCA 
ACGATTCCAC TACCGAAAGC ACCCGATATC ACGAAGCAGG GATACGGGCA AAGCTTTGCG 
GGGCTCGATC TGATAACCAA AACAGTCAGC ACGCGCCTGA AGCACTACTT CAATAATGAC 
TGGTACGCCT CAGGCGGTGT GGGCTATCAA ACTGCCGATC GCGGTATGCG CTCGCTATCG 
CATAATATTT TGCCATCAGG GGATGTGGAA ACCACGCTGG AGCAGCAATA CTCATCTGGG 
CGTTTCCGGG TTCTGAGCAA TACGCTGCAA CTGAATGGTC ATATTGATAC GGATGGGCCT 
TCCCACGATG TGGTATTCAG TACCACCGGG TATCAGTGGA CGAAGTTTTC TTCTCCCGGC 
GGCCCTCATA ATTATACGCT AGGGACGAGC CCCATCAATG CGCCGCAGCG CTATAACGAC 
CCCAGCGATG GACGTTTTTA TGTTGGTTCC GGTCACTATA AATCTAGCCG TGACAGTCAA 
CAGGCTATCA CCGCGGGCGA TACCATCACC TTCAACGATC GCTGGTCGGC GATGGGCGTG 
GTGAGCCAAA GCTGGTTGAC CTCACGCAGC TTCACTAATG GCAACGTGCA ACGTGCGACG 
GGTACTAGCC CGACGGTGTC GCTGATGTAC AAGCCCTTGC CTAACGTGAT GACGTATGTC 
GCCTATGCCG ATTCTCTGGA ACAGGGGGAT ACCGCCCCTA AAGGCGCGGT GAACAAAGAG 
CAGGCGCTGA AGCCTTACCG CAGTACCCAA TATGAAGCGG GCGTGAAGTC CCAATGGGAT 
GGGGTGAACC TGAATGCGGC GGTATTCCGT CTGGAGCGCC CTTTCGCCTA TGTTGATCCT 
ACCGATCGCG TGTTCAAAGA GCAGGGGAAA CAGGTTAATA CCGGGTTAGA ACTGACGGCG 
GATGGTGAAG TCTTTTCTGG TTTGCATGTC TATGGCGGTA TGACGTTATT GGATCCCAAG 
CTGAAGGATA CGGGGATTGA TGCAACGACG AATAAACGAG TCGTTGGGGT ACCGAAGTTC 
CAGGCTAATC TGTTAACGGA ATACAGTCAC CCGTCTTACC CGAATATGGT CTATACGGCG 
AACCTTCATT ACACCGGTAA ACGCGTTGCT AATAACACCA ACACGACGTG GGTAGATAGC 
TATATGACGC TGGATCTGGG TACGCGCTAT GGCTTCAAAA TTTATGATAA ACCTGCGGCA 
TTTCGTGTCG CGCTCAATAA CGTCACCAAT GAGCACTACT GGAGCTCGCT CTTCCCCTAT 
CGGCAGAACG GAGAAGGGCA AGGCTACAGC GCGTTTGTCG GTGAACCGCG TGAAATCCGC 
GCTTCTCTGA CCGTTGATTG GTGA 

 

Protein sequence

MKARKNNRKK AQWLLPVLMV VVPPVLSAEP TTSKDSEKTK SADVMVVKAE RSEANANLAG 
AGMATDNVDL GPLGKRARLD TPYSTTTVTE AMVNNQQAKN VNDLLKYNAS SQMQARGGID 
VGRPQSRGMQ GSVLANSRLD GLNIISTTAF PVEMLERLDV INSLTGALYG PASPAGQFNF 
TQKRPTAQTL NRFTVGYSGK GAAMGHADLG GHLGDENQFG YRINLLQDEG EGSISNSTLR 
RQLASVAFDW NLSPDTVLEV NASEYRFRKM GYAGDFAYDP TIPLPKAPDI TKQGYGQSFA 
GLDLITKTVS TRLKHYFNND WYASGGVGYQ TADRGMRSLS HNILPSGDVE TTLEQQYSSG 
RFRVLSNTLQ LNGHIDTDGP SHDVVFSTTG YQWTKFSSPG GPHNYTLGTS PINAPQRYND 
PSDGRFYVGS GHYKSSRDSQ QAITAGDTIT FNDRWSAMGV VSQSWLTSRS FTNGNVQRAT 
GTSPTVSLMY KPLPNVMTYV AYADSLEQGD TAPKGAVNKE QALKPYRSTQ YEAGVKSQWD 
GVNLNAAVFR LERPFAYVDP TDRVFKEQGK QVNTGLELTA DGEVFSGLHV YGGMTLLDPK 
LKDTGIDATT NKRVVGVPKF QANLLTEYSH PSYPNMVYTA NLHYTGKRVA NNTNTTWVDS 
YMTLDLGTRY GFKIYDKPAA FRVALNNVTN EHYWSSLFPY RQNGEGQGYS AFVGEPREIR 
ASLTVDW