Gene Pecwa_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3543 
Symbol 
ID8531969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp3896922 
End bp3897998 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content55% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_003260886 
Protein GI261822780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAC GTAACCTTAC CATGCGGTAT CGCGAGTATT TGCTCAATGC GTTAGTGCTG 
CTGGCGGTGA GTTTCTCCGG TGTGCACCGG GTTCAGGCGG AAACGCCTGA ACCCGCTACG
CGGACGATTC ACTATTACGG CGATCGCTCT GTGACGGTGC CCGCGACGGT TGAGCGAGTT
GCCACCTCAT GGAATGCGCA AAATTCGATA CTGGCTATGC TGGGCTATGG CGATCGTATT
GTCGGGACGA CGAAGCTGGT GCGCGATATG CCGTTATTCC GCCAGTTTGT GCCGTCTATT
ACGCAGGCGT CGCTGGTCGC TCATAGCGGA AACATGGGAA TTAATACCGA AGCGCTGATT
TCTCGCCGTG CTCAGGTCTT TTTCGTATCG GACAGCGTGC CGGTTGCTGA AGCCGAGGCG
CTGAATAAAG CGGGGATCGC TATTGTGCCG CTCCGCTATA ATTCGCTGGC GGCGATGGTC
GAACGCACGC TGATTACTGG TGAGGTTCTG GGGCCGGACG CATCACGTCG GGCGCAGGAT
TTTGCTGCCT ACTATCAGGA TAACGTCAGG CGTGTGACGG AGGTGATCCA GAACATTCCG
TCACAACAGC GTGTGAAGGT CTACCATGCG GTTGGCGATC CGTTAACGAC ATCGGGACGT
CCTTCACTGA ATCAGGACTG GATGGATCTG GGCGGCGCGA TCAACGTGGC AGAGCCGTGG
TTTAGCCGTT CTGGGGTGAC AACCGCACCT GTATCGCTTG AGCAGATTTT TCAGGCCGAT
CCCGATGTGA TTATTACGAT GCGGGCTGAG GATGCGAAGA CAATTCGCCA GGATGCGCAG
TGGCAGCAGC TACGTGCGGT AAAAGAAGGG CGGGTTTATG CCAATCCGCT GGGCATGTTT
TGGTGGTGTC GGGAAACGTC GGAGCAGGCG TTGCAATTTC TTTGGCTGGC AAAAACGCTG
TATCCACAGC AGATGCAGCA CATCGATATG GCAAAAGAGA CGCATGATTT TTATCTGCGT
TTTTACGGCA TCGATTTAAC CGCGCAGCAG GTTGAGTCAA TTTTGTCACC ACACTGA
 
Protein sequence
MQKRNLTMRY REYLLNALVL LAVSFSGVHR VQAETPEPAT RTIHYYGDRS VTVPATVERV 
ATSWNAQNSI LAMLGYGDRI VGTTKLVRDM PLFRQFVPSI TQASLVAHSG NMGINTEALI
SRRAQVFFVS DSVPVAEAEA LNKAGIAIVP LRYNSLAAMV ERTLITGEVL GPDASRRAQD
FAAYYQDNVR RVTEVIQNIP SQQRVKVYHA VGDPLTTSGR PSLNQDWMDL GGAINVAEPW
FSRSGVTTAP VSLEQIFQAD PDVIITMRAE DAKTIRQDAQ WQQLRAVKEG RVYANPLGMF
WWCRETSEQA LQFLWLAKTL YPQQMQHIDM AKETHDFYLR FYGIDLTAQQ VESILSPH