Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3543 |
Symbol | |
ID | 8531969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3896922 |
End bp | 3897998 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | periplasmic binding protein |
Protein accession | YP_003260886 |
Protein GI | 261822780 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAC GTAACCTTAC CATGCGGTAT CGCGAGTATT TGCTCAATGC GTTAGTGCTG CTGGCGGTGA GTTTCTCCGG TGTGCACCGG GTTCAGGCGG AAACGCCTGA ACCCGCTACG CGGACGATTC ACTATTACGG CGATCGCTCT GTGACGGTGC CCGCGACGGT TGAGCGAGTT GCCACCTCAT GGAATGCGCA AAATTCGATA CTGGCTATGC TGGGCTATGG CGATCGTATT GTCGGGACGA CGAAGCTGGT GCGCGATATG CCGTTATTCC GCCAGTTTGT GCCGTCTATT ACGCAGGCGT CGCTGGTCGC TCATAGCGGA AACATGGGAA TTAATACCGA AGCGCTGATT TCTCGCCGTG CTCAGGTCTT TTTCGTATCG GACAGCGTGC CGGTTGCTGA AGCCGAGGCG CTGAATAAAG CGGGGATCGC TATTGTGCCG CTCCGCTATA ATTCGCTGGC GGCGATGGTC GAACGCACGC TGATTACTGG TGAGGTTCTG GGGCCGGACG CATCACGTCG GGCGCAGGAT TTTGCTGCCT ACTATCAGGA TAACGTCAGG CGTGTGACGG AGGTGATCCA GAACATTCCG TCACAACAGC GTGTGAAGGT CTACCATGCG GTTGGCGATC CGTTAACGAC ATCGGGACGT CCTTCACTGA ATCAGGACTG GATGGATCTG GGCGGCGCGA TCAACGTGGC AGAGCCGTGG TTTAGCCGTT CTGGGGTGAC AACCGCACCT GTATCGCTTG AGCAGATTTT TCAGGCCGAT CCCGATGTGA TTATTACGAT GCGGGCTGAG GATGCGAAGA CAATTCGCCA GGATGCGCAG TGGCAGCAGC TACGTGCGGT AAAAGAAGGG CGGGTTTATG CCAATCCGCT GGGCATGTTT TGGTGGTGTC GGGAAACGTC GGAGCAGGCG TTGCAATTTC TTTGGCTGGC AAAAACGCTG TATCCACAGC AGATGCAGCA CATCGATATG GCAAAAGAGA CGCATGATTT TTATCTGCGT TTTTACGGCA TCGATTTAAC CGCGCAGCAG GTTGAGTCAA TTTTGTCACC ACACTGA
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Protein sequence | MQKRNLTMRY REYLLNALVL LAVSFSGVHR VQAETPEPAT RTIHYYGDRS VTVPATVERV ATSWNAQNSI LAMLGYGDRI VGTTKLVRDM PLFRQFVPSI TQASLVAHSG NMGINTEALI SRRAQVFFVS DSVPVAEAEA LNKAGIAIVP LRYNSLAAMV ERTLITGEVL GPDASRRAQD FAAYYQDNVR RVTEVIQNIP SQQRVKVYHA VGDPLTTSGR PSLNQDWMDL GGAINVAEPW FSRSGVTTAP VSLEQIFQAD PDVIITMRAE DAKTIRQDAQ WQQLRAVKEG RVYANPLGMF WWCRETSEQA LQFLWLAKTL YPQQMQHIDM AKETHDFYLR FYGIDLTAQQ VESILSPH
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