| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3542 |
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| Symbol | |
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| ID | 8531968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3895046 |
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| End bp | 3896605 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | oligogalacturonide transporter |
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| Protein accession | YP_003260885 |
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| Protein GI | 261822779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.578582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAC GTAAGATCGG TTTGGCTAAC TATTTAGCTT ACGGTTCAGG GGACTTTCTT
GGTGCGGGTA CAACCGCGCT GACGGCCGCT TGGTTACTCT ATTTTTACAC CACGTTCTGT
GGCTTAACGC CGATTGAGGC AACTTTCATT TTTGCGATGG CGCGTGTGCT CGATGCCGTC
GTCAGCCCGC TGATGGGCTT CCTGACCGAT AACTTCGGTT CAACTTGGTT AGGTAAACGC
TTTGGCCGAC GTAAATTCTT TATTTTGCTC GGAATTCCCT TTGTGTTTAG CTACAGCTTC
ATGTGGGTGG GGGATATGAG CTATTGGTAC TATCTCCTGA CCTACCTGTT GTTTGATGTC
GTGTACACCA TGGTGCTGGT GCCGTATGAA ACGCTGGTGC CGGAAATGAC CGACGATTTC
AAACAGAAAA CCAAGTTCTC CGGCGCACGT ATCGCGCTGG CACAGCTTTC CGCGATTTTA
GCCGCCTTTC TGCCGGGCAT CCTGCTGAGC TACTTTGGCA AAGACAATGC GGTATCCTTC
TTCTATTCGA GCCTGGTGTT CTCCGTTATC TGTGCGCTGG TTCTGACGTT GGTCTATTTC
TTTACCTGGG AGCGGCCACG CGATCAGATG TCGGAAGCGT CGCTACGGGC TGAGAAAGAG
CGGCAGTCTC TGACGCTGGG CCAAAGCCTG AAACGCCTTA ATGTTGAACT GGTTTCCACG
CTGCGTATTC GTATTTTCCG CCAGCATCTC GGTATGTATC TGGGCGGGTA TATCGCGCAG
GATGTGTTCA ATGCCGTGTT CACTTACTAC GTGGTCTTTG TGCTGATGCA AAGTCCAACG
ATGGCGTCTA ACCTGATGGG AACGATGGCG ATTCTGCAAT TCATCGCCGT GATCGGCATG
ATCCCGCTGT GTATTCGCTT TGGGCCAGCG CCATCTTACC GTCTGGTTGT GTGTCTGTTT
GGCCTGAGTG CGTTCTCCTA CGCCGTTTTG TGGTACAGCG GCCTGCATGA CACCTTCTCT
CTGTTACTGC TGATCTCTGC GCTGGCGGGC ATCGGGCGCG GTGGGATCAA CTATGTACCG
TGGAACACCT ACACATATAT CGCGGATGTG GATGAAGTAA TCACCGCTCA GCGTCGTGAA
GGGATCTTCG CTGGGATTAT GACGTTGACC CGTAAAGCCT CTCAGGCTGG TGCGGTGATG
CTGGTGGGGA TTGTGTTGCA ACTCTCTGGT TTCGTGTCTG GGCAAAGCGT ACAAGCGCCG
GGCGTCAGTC ACACTATCTT GATGATTTTG AGCTTCGGCA CCGTAGGTGT GCTGGTGTTG
GGCTTCCTGG TCTCTCTCCG CTTTAAACTC AACCTGCAAA CGCATAGCGT GCTGCGCGAG
GAAACGCTGA AAATGCGTGA GGCTGGGCGT CCTGTGCCAG AGAATATTAC CCCGCAGGCG
CGGGCTACGG TCGAAATGCT GGCGGGTATG CCGTATGAAT CGCTGTGGGG CAACAACAAT
ATCGGCTACC TGAACCGCCA TAAAGGTGAC AAGCCGATAA CGCACGCCAC GCAGTCGTAA
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| Protein sequence | MKTRKIGLAN YLAYGSGDFL GAGTTALTAA WLLYFYTTFC GLTPIEATFI FAMARVLDAV
VSPLMGFLTD NFGSTWLGKR FGRRKFFILL GIPFVFSYSF MWVGDMSYWY YLLTYLLFDV
VYTMVLVPYE TLVPEMTDDF KQKTKFSGAR IALAQLSAIL AAFLPGILLS YFGKDNAVSF
FYSSLVFSVI CALVLTLVYF FTWERPRDQM SEASLRAEKE RQSLTLGQSL KRLNVELVST
LRIRIFRQHL GMYLGGYIAQ DVFNAVFTYY VVFVLMQSPT MASNLMGTMA ILQFIAVIGM
IPLCIRFGPA PSYRLVVCLF GLSAFSYAVL WYSGLHDTFS LLLLISALAG IGRGGINYVP
WNTYTYIADV DEVITAQRRE GIFAGIMTLT RKASQAGAVM LVGIVLQLSG FVSGQSVQAP
GVSHTILMIL SFGTVGVLVL GFLVSLRFKL NLQTHSVLRE ETLKMREAGR PVPENITPQA
RATVEMLAGM PYESLWGNNN IGYLNRHKGD KPITHATQS
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