| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3527 |
|---|
| Symbol | cysJ |
|---|
| ID | 8531953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3876690 |
|---|
| End bp | 3878519 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | sulfite reductase subunit alpha |
|---|
| Protein accession | YP_003260870 |
|---|
| Protein GI | 261822764 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.400097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTC CGGTTTCCCC CACTTCATTG CTTCCGCTGA GTGCGGAGCA ATTAACGCGT
CTACAGGCGG CAACCGGTGA TTTCTCATCG ACGCAGCTAG CCTGGCTATC CGGCTATTTC
TGGGGGTTGG TACAGCAGCC TGGGAACGTG CAGCCAGGTG CGATAACGGC CACCGCTACG
GTGGCATCCG CAGTTACGGT GCCAGTGCAA ACCATTACGC TGATCTCCGC CTCGCAGACG
GGCAACGCGC GTCGGGTCGC GGAACAATTG CGTGACGACC TTCTGGCGGC CAAGCTGTCC
GTCAATCTGG TCAATGCGGG TGATTACAAG TTCAAGCAAA TTGGGCAGGA AAAACTGCTG
CTGATCGTAG CTTCGACCCA GGGTGAAGGG GAGCCGCCAG AAGAGGCGGT CGCGCTGCAT
AAGTTTCTGC TGTCCAAAAA AGCCCCGGCG CTGAAAGACA CCGCGTTTGC CGTGTTTGGT
CTGGGGGATA CTTCTTACGA ATTCTTCAGC AAGGCGGGTA AGGATTTCGA TAGCCGTCTG
GCTGAGTTAG GCGCTGAGCG CCTGCTGGAT CGCGTTGATG CTGATGTGGA TTATCAGGCG
CTTGCTGGGC AATGGCGGCG CCAACTGGTT GATATTTTGC AGGCACGGGT GCCGGTTCAG
GGTGAAGCCG TCGCGCAGAT TGCCGCTCAG GGCGCACTGG ATGAAATTAC CAGCAGCCCG
TACAGCAAAG CCTCGCCGTT GCGGGCCACC TTTGCAGTGA ATCAGAAAGT GACCGGACGT
AACTCCGAAA AAGATGTTCG CCATATCGAG ATCGATCTGG GGGATTCAGG CTTACGTTAT
CAGCCGGGAG ATGCGTTAGG CGTGTGGTTC GATAACGATC CTGCGCTGGT GCAGGAACTG
TTGGAACTAC TGTGGCTGAA AGGTGATGAA TCCGTCAGCG TTGACGGTGA GACGCTGCCA
CTATCGCAGG CGCTGAAAAG CCACTTTGAG TTGACGCAAA ACACCGCGCC GATCGTCGAG
AAATATGCCG CGCTGTCGCG CAATGAGACG CTATTGTCAC TGCTGGCCGA TAAGTCTGCG
CTTCAGCAGT TTGCGCAGCG GACGCCACTG GTGGATATGG TGCGACAAGC GCCAACAGAA
CTGACGGCGG AGCAGTTGCT TGGCCTGCTG CGCCCGCTGG CACCGCGTCT TTACTCTATC
GCCTCCTCGC AGGCAGAGGT CGAAAGCGAA GTACACATCA CCGTTGGCGT GGTGCGCTAC
GAATACGAAG GCCGTGCGCG TGCCGGTGGA GCCTCCAGCT ATCTGGCCGA TAGGCTGAGT
GAAGATGATG AAATCCGTGT TTTCATCGAA CATAACAATA ATTTCCGCCT GCCTGCTAAT
TCAGATGCGC CAGTCATCAT GATTGGGCCG GGCACCGGCA TTGCACCGTT CCGCGCGTTT
ATGCAGCAGC GCGATGCCGA AGGGGCGGAA GGGAAGAACT GGCTGTTCTT CGGTAATCCA
CACTTTACGG AAGATTTTCT GTATCAGGTT GAGTGGCAGC GCTACGTTAA AGATGGCCTG
CTGACGGCTA TCGATCTGGC CTGGTCGCGC GATCAGGCGC ACAAGGTCTA TGTACAGGAC
AAACTGCGGG AAAAAGGCGC GGAAGTCTGG CGCTGGATCC AGGACGGGGC GCACCTGTAC
GTGTGCGGTG ATGCCAATCG TATGGCGAAA GACGTCGAGC AGGCATTGCT GGATGTGATA
GTTGAGCATG GCGGCATGGA CAGTGAACAG GCCGATGAGT TTTTAAGCGA TCTGCGCCTT
GAGCGCCGTT ATCAGCGAGA TGTGTACTAA
|
|---|
| Protein sequence | MTTPVSPTSL LPLSAEQLTR LQAATGDFSS TQLAWLSGYF WGLVQQPGNV QPGAITATAT
VASAVTVPVQ TITLISASQT GNARRVAEQL RDDLLAAKLS VNLVNAGDYK FKQIGQEKLL
LIVASTQGEG EPPEEAVALH KFLLSKKAPA LKDTAFAVFG LGDTSYEFFS KAGKDFDSRL
AELGAERLLD RVDADVDYQA LAGQWRRQLV DILQARVPVQ GEAVAQIAAQ GALDEITSSP
YSKASPLRAT FAVNQKVTGR NSEKDVRHIE IDLGDSGLRY QPGDALGVWF DNDPALVQEL
LELLWLKGDE SVSVDGETLP LSQALKSHFE LTQNTAPIVE KYAALSRNET LLSLLADKSA
LQQFAQRTPL VDMVRQAPTE LTAEQLLGLL RPLAPRLYSI ASSQAEVESE VHITVGVVRY
EYEGRARAGG ASSYLADRLS EDDEIRVFIE HNNNFRLPAN SDAPVIMIGP GTGIAPFRAF
MQQRDAEGAE GKNWLFFGNP HFTEDFLYQV EWQRYVKDGL LTAIDLAWSR DQAHKVYVQD
KLREKGAEVW RWIQDGAHLY VCGDANRMAK DVEQALLDVI VEHGGMDSEQ ADEFLSDLRL
ERRYQRDVY
|
|---|
| |