Gene Pecwa_3513 details

Gene Information

• Locus tag: Pecwa_3513
• ID: 8531939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3862609
• End bp: 3863373
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 54%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003260856
• Protein GI: 261822750

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.394496
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACGGGAT TTCGTTGGGA GATCATTCAG GAATATGCCC CTTTGTTTAT GGAAGGCACC 
TGGATGACCA TCAAATGCAC CATTATTTGT GTCATTCTTG GCACCTGCTG GGGATTAACG 
CTCGGATTAG GCCGCTTAGC ACAAGCGCCG CACGGGCCGT GGAAATATAT CCTGCACTAC 
GGCGTTCAAT GGCCGGTACG AATCTACATC AGCGCCTTTC GGGGTACGCC GTTGTTTGTG 
CAAATCATGG TGGTGCACTT CGCACTGGTA CCGCTGTTCA TCAACCCGCG TGACGGGCTG 
CTGGTCACCA GCAATATTAT GTCGGTCGAT TTTGCCCGTA CATTACGCTC GGATTACGGC 
GCGTTCCTCT CTTGCGTGGT AGCCATCACG CTGAACGCAG GTGCCTATGT CTCTGAGATA 
TTCCGCGCCG GTATTCAGTC TATCGATCGC GGTCAAATGG AGGCGTCACG CTCTCTCGGC 
ATGAGCTATG GCCGCACCAT GCGGAAAGTG ATCCTGCCAC AGGCTTTCCG CCGTATGCTG 
CCACCGCTGG GTAATAACGC CATCGCTATA GTGAAAGATT CCTCACTGGC TTCGGCGATC 
GGGCTGGCGG ATCTCGCCTA TGCCGCTCGC ACGGTGTCAG GGGCTTACGC CACGTACTGG 
GAACCCTACC TGGCGATCTC TATCGTCTAT TGGGTTATTA CTTTCCTGCT CTCGCTGCTG 
GTGCGGCACA TGGAAATGAG GTTTGGCAAA AGTGATTCAC GTTAA 

 

Protein sequence

MTGFRWEIIQ EYAPLFMEGT WMTIKCTIIC VILGTCWGLT LGLGRLAQAP HGPWKYILHY 
GVQWPVRIYI SAFRGTPLFV QIMVVHFALV PLFINPRDGL LVTSNIMSVD FARTLRSDYG 
AFLSCVVAIT LNAGAYVSEI FRAGIQSIDR GQMEASRSLG MSYGRTMRKV ILPQAFRRML 
PPLGNNAIAI VKDSSLASAI GLADLAYAAR TVSGAYATYW EPYLAISIVY WVITFLLSLL 
VRHMEMRFGK SDSR