| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3510 |
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| Symbol | ispD |
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| ID | 8531936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3860297 |
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| End bp | 3861010 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003260853 |
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| Protein GI | 261822747 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAACAC CACGCCTTTC CCCGCCTGAA ATTGTTGCTG TTTTACCCGC CGCGGGTAAC
GGCAGCCGGA TGCAGAACGA TCGTCCTAAA CAGTACCTGA CGATTGGCAA TGATGCGATC
GGCCATAAAA CCATTCTTGA ACATACCATC GAGGCGCTTT TACGCCATCC ACGCGTACAG
CGTGTCGTTG TCGTTATCAG TCCAGATGAC GTATTTTTTC ATACTCTGGC GATTGCCCAC
GATCCTCGTA TTTGTACAGT GACGGGCGGG CAGCAGCGTG CGGATTCCGT ACTGGCTGGG
CTGGCTGTCG TTGCTGATAC GGCGTGGGCG TTAGTGCATG ATGCTGCGCG TCCGTGCCTG
CATCAGGACG ATCTTACTCG TTTATTGGCG ATTGCCGGAC AGAGTGACGT CGGCGGAATT
TTGGCCGCAC CGGTTCGTGA TACCATGAAA CGCGGCACGG ATGGGTTTAT CGACCGCACG
GTAGAACGTA ACGATTTGTG GCATGCGCTG ACGCCGCAAC TTTTTCCGGC GGCGCTGCTG
AAACCGTGTT TGCAACGCGC GCTTCAGGAT GGCATTACCG TCACGGACGA AGCCTCTGCG
CTGGAATATT GTGGCTATCG TCCGCAAATT ATCAGCGGGC GTTCGGATAA TATCAAAGTC
ACGCGTCCAG AGGATTTGGC ATTAGCTGAA TTCTATTTAA CCCGTTTGCA GTAA
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| Protein sequence | MQTPRLSPPE IVAVLPAAGN GSRMQNDRPK QYLTIGNDAI GHKTILEHTI EALLRHPRVQ
RVVVVISPDD VFFHTLAIAH DPRICTVTGG QQRADSVLAG LAVVADTAWA LVHDAARPCL
HQDDLTRLLA IAGQSDVGGI LAAPVRDTMK RGTDGFIDRT VERNDLWHAL TPQLFPAALL
KPCLQRALQD GITVTDEASA LEYCGYRPQI ISGRSDNIKV TRPEDLALAE FYLTRLQ
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