Gene Pecwa_3503 details

Gene Information

• Locus tag: Pecwa_3503
• ID: 8531929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3852607
• End bp: 3853323
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 52%
• Product: protein of unknown function UPF0066
• Protein accession: YP_003260846
• Protein GI: 261822740

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0149186
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAAT TTGTTTTCAA TCAGATCGGG ATTATCCGTT CACCGTATAA AGAAAAATTT 
GCCATTCCGC GGCAACCGGG TCTGATTGAA GATGGAGGCG GAGAACTTCA GCTATTACCG 
CCGTATAACC AAGCTGACTG TGTGCGGGGA CTAGAAGACT TCAGCCACAT TTGGCTACTG 
TTCATCTTTC ATCAAACGAT GGAAGGCGGC TGGCGTCCAA CGGTTCGACC ACCGCGTCTG 
GGGGGAAATG CTCGAACAGG CGTTTTCGCT ACCCGTTCCA CCTTTCGCCC CAACCCTGTC 
GGTATGTCGC TGGTTGAATT AAAAGGAATA CGAGCCAAAG GAGATGCGAT TACGCTCGAA 
TTAGGTAGCC TTGATTTGGT CGATGGTACA CCGGTCATCG ATATCAAGCC TTACCTACCC 
TTTGCAGAAA GCCACCCTCA GGCACGAGCG GGTTTTGCCC AAATGGCCCC CGAGGCCACG 
ATGCCGGTAT TTTTTTCGCC ACTTGCGGAA AACCAAATTG CAGGGCACCA AAATAAATAT 
CCCCAGTTGA AACGCTTTAT CTCGCAGGTA TTGGCACAAG ATCCGCGTCC CGCCTACCGC 
AAAGGGGAAA GCACCACGCG GGAATACGCC GTTTTACTGT TGGAATTCAA TGTGCGCTGG 
CGCGTCTGTG GAGAACAAAC CGAAGTGTTA AGCCTCGACC CCGCGCACAC GTGCTAA 

 

Protein sequence

MSQFVFNQIG IIRSPYKEKF AIPRQPGLIE DGGGELQLLP PYNQADCVRG LEDFSHIWLL 
FIFHQTMEGG WRPTVRPPRL GGNARTGVFA TRSTFRPNPV GMSLVELKGI RAKGDAITLE 
LGSLDLVDGT PVIDIKPYLP FAESHPQARA GFAQMAPEAT MPVFFSPLAE NQIAGHQNKY 
PQLKRFISQV LAQDPRPAYR KGESTTREYA VLLLEFNVRW RVCGEQTEVL SLDPAHTC