| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3486 |
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| Symbol | |
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| ID | 8531906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3830212 |
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| End bp | 3831387 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | efflux pump membrane protein |
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| Protein accession | YP_003260830 |
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| Protein GI | 261822724 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA GTGTGGAAAA TCAGGTGCCG CAGACGCCGC AAAGAAACAA GAAACAGCAG
CGGAAACGCG TGTTATCGCT GCTGACATTT ATTTTCGTCG TGCTGGGCTG TGCTTGGCTA
GTTTACTGGT TCCTGGTTCT CAGACATCAC CAAAGCACTG ACGATGCCTA CGTCGCAGGC
AACCAGATTC AGATCATGGC ACAGGTTACA GGCAGCGTCA CCCATGTGAA CGTCGACAAT
ACTGACTTTG TTAAGCAGGG ACAGGTGTTA GTGGAGTTGG ATCCTACCGA TGCCCAGCAG
GCATTCGAGC GTGCGAAAAC CGCATTGGCT AACAGCGTGC GCCAAACGCA TCAGTTGATT
ATCAACAGCA AACAATATCA GGCCAACATC GAACTGCGTC AGACAGAACT GAACAAGGCG
CAAAGCGACT TAAGCCGCCG TGAAGCACTG GGCAGCGCGA ACGCTATCGG GCGTGAAGAA
GTACAGCATG CTCGCGATGC CGTCGCGACC GCCAAAGCAG CGTTGGAAGT GGCCAGACAA
CAATATCAGG CGAACCAGGC GATGATTCTG GATACACCGC TTGAGAAACA ACCCGCCATA
CAGCAAGCCT CTGTAGAAAT GCGCGATGCC TGGTTAGCGC TACAGCGCAC CAAAATTGTC
AGCCCGATTG ACGGCTACAT CTCACGCCGC AGCGTGCAGA TTGGCGCTCG CATCTCCTCA
ACCTCAGCGC TGATGGCTGT CGTTCCCGCC AATCACCTGT GGGTTGATGC TAACTTCAAA
GAGACGCAGC TAGCCAATAT GCGCATCGGC CAACCCGCCA CCGTGATCGC GGATATCTAC
GGCGATGACG TCGTGTATCA GGGAAAAGTG GTCGGCCTCG ATATGGGAAC CGGTAGCGCG
TTTTCTCTGC TGCCAGCCCA GAACGCGACC GGAAACTGGA TTAAAGTGGT TCAGCGCCTG
CCAGTGCGTA TTGAGATCGA TCCGAAGCAG GTTGCCGAAC ATCCGTTGCG CATCGGCCTG
TCTGCATTGG TCAATGTCGA TACCGCCAAT ACCGAAGGCA GCGCGTTAGC AGAAACATCG
CGCACCACGC CAGCCTACCA AAGTGATGCG CTGACGTTGG ATCTCACCCC CGTTAACCAA
GACATTAGCA CCATTATTCA AGCCAATGCC GGTTAA
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| Protein sequence | MSESVENQVP QTPQRNKKQQ RKRVLSLLTF IFVVLGCAWL VYWFLVLRHH QSTDDAYVAG
NQIQIMAQVT GSVTHVNVDN TDFVKQGQVL VELDPTDAQQ AFERAKTALA NSVRQTHQLI
INSKQYQANI ELRQTELNKA QSDLSRREAL GSANAIGREE VQHARDAVAT AKAALEVARQ
QYQANQAMIL DTPLEKQPAI QQASVEMRDA WLALQRTKIV SPIDGYISRR SVQIGARISS
TSALMAVVPA NHLWVDANFK ETQLANMRIG QPATVIADIY GDDVVYQGKV VGLDMGTGSA
FSLLPAQNAT GNWIKVVQRL PVRIEIDPKQ VAEHPLRIGL SALVNVDTAN TEGSALAETS
RTTPAYQSDA LTLDLTPVNQ DISTIIQANA G
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