Gene Pecwa_3480 details

Gene Information

• Locus tag: Pecwa_3480
• ID: 8531900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3824739
• End bp: 3825320
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 50%
• Product: protein of unknown function DUF1470
• Protein accession: YP_003260824
• Protein GI: 261822718

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACACAT CACCGATAAC TCAGCCTCAC TTTCTCGCGA ATAATCTCGC GTTGGACCTC 
ATTAACAGTG CATTTGGCAC AGGAAGCGAA TACCACGACT GTTTGACGGA TGACGCAAGT 
GTCATCGCAT GGCTTAAAGC AGCTAAACAA CTACCTGAAA ATTTTACAGA CACGCCGACC 
GGCCTGATTA ATGAAGCTCT GGCATTGCGT CAGGCAATGG TTCAGACAAT AGATGCCGTC 
CGATCGGGTA AGGAATATGA CCCTGAACGA ATAAACCATA TTCTTGATAG TGGACGGTCG 
GTAAGAATGC TGGAATGGAA TAGTCAGCAA ACCGGTTTTA GCGTTGTTGA ACGCAGGAGG 
GATAATAGCT GCGCCAGCTT ACTCGAACCG GTAGCAATGG CGTTCGCTGC TCTGATTTCC 
GGGTCTGAGG TAAAATATAT TCGCCAGTGT GAGGCGCACG ACTGTACCCT GTTCTTTCTG 
GATACCACCA AATCACATCG TCGGCGATGG TGCAGCATGG CGCTCTGTGG CAACAGGATG 
AAAGTCGCAG CCTTCCGCTC GCGTAAGCAG GAAGCAGACT GA 

 

Protein sequence

MHTSPITQPH FLANNLALDL INSAFGTGSE YHDCLTDDAS VIAWLKAAKQ LPENFTDTPT 
GLINEALALR QAMVQTIDAV RSGKEYDPER INHILDSGRS VRMLEWNSQQ TGFSVVERRR 
DNSCASLLEP VAMAFAALIS GSEVKYIRQC EAHDCTLFFL DTTKSHRRRW CSMALCGNRM 
KVAAFRSRKQ EAD