| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3470 |
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| Symbol | |
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| ID | 8531890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3814370 |
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| End bp | 3815212 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003260814 |
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| Protein GI | 261822708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATGC AAATAGATGA ACGATTACGG GATCGCTACA GCGAGCTTCC ACCGCAGGAA
CAGCGTGTTG CGGATTTCAT CTTCGATCAC TTTGACGATC TGATCAGCTA CAACAGCGCC
GAGCTGGCAC GGCTGAGTGG CGCTTCCAAA GCGACCGTCA GCCGCTTGTT CAAACGATTG
GGCTACCCCA GCTACCGCGA CATGCGCGAT GAACTGAGAA CGTTGCGCCA GAGTGGGATG
CCGCTGGCGG ATAACCGCGA TACGGTGCAG GGGAATACGC TGCTGGCACG GCATTACAAA
CAGGAAATGG CGAACCTGAC GCAGTGGATA AACCAGATTG ACTCCGTACA GTTTGGTGCC
GTGATTCAGG CGCTGATGCA GGCGCAGCGC CTGTGTCTGA TTGGGCTACG CAACAGCTAT
CCGGTCGCGC TGCATCTGCG CCAACAGTTG CTTCAGATTC GCCAACAGGT CACGCTGCTG
ACGCAGCCGG GGCAGACGCT ATCCGAAGAG CTGGTCGATC TCACGGCGCA GGATGTTGTG
ATTGTGGTGG CCTTTCGCCG CCGCTCACGG TTAATCCAGC CGCTGCTGGT GCAACTGCAA
AAACGTGGCG TGCCTGTGCT GCTGCTCTGC GAACCTCAGG TGAGTGCGCT GATGCCGTTG
GCAACCTGGT CGCTGTGCGT TCCGCTGGAC AGCGTATCGG CGTTTGATAG CTATTCGTCC
GCCATGAGTC TGGTGAATGT GATCAGTAAT GCGCTATTGC ATGAAATGCT GCGTGATGGA
CGCCAGCGCA TCCACCAGAT CGCGGATCTT TATGGTGAAC TGGAGGAGCT TGAGCAACGT
TAA
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| Protein sequence | MMMQIDERLR DRYSELPPQE QRVADFIFDH FDDLISYNSA ELARLSGASK ATVSRLFKRL
GYPSYRDMRD ELRTLRQSGM PLADNRDTVQ GNTLLARHYK QEMANLTQWI NQIDSVQFGA
VIQALMQAQR LCLIGLRNSY PVALHLRQQL LQIRQQVTLL TQPGQTLSEE LVDLTAQDVV
IVVAFRRRSR LIQPLLVQLQ KRGVPVLLLC EPQVSALMPL ATWSLCVPLD SVSAFDSYSS
AMSLVNVISN ALLHEMLRDG RQRIHQIADL YGELEELEQR
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