Gene Pecwa_3467 details

Gene Information

• Locus tag: Pecwa_3467
• ID: 8531887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3811652
• End bp: 3812305
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 56%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003260811
• Protein GI: 261822705

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTTA CCGACTGGGA TATTGTGCGC AACCTGCTGC TGGCGGCGCG TTGGACGCTG 
CTATTGTCGC TGACGGCCTT CATCGGCGGG GCGCTGGTGA CGTTTCCGCT TATGCTATTG 
CGGCTGACCA AACGCAAATG GGCGACGCGC TTTGTCCATC TGTATTCCGA GTTATTTCAG 
GGCACGCCGC TGCTGATGCA GTTGTTTCTC GCGTTCTTCG GTCTGGCGCT GTTCGGTATT 
GATGTCAGCC CGTGGACGGC GGCCGCACTG GCGCTGACGC TGTTTACCAG CGCCTTTCTG 
GTGGATATCT GGTGCGGCAG CGTGGAAGCC TTGCCGAAAG GGCAGTGGGA AGCCTCACGC 
TGTCTCGGGC TGGATTTCGG TCAGACGCTC TATCGGGTGA TTGCGCCGCA GGCGATGCGT 
ATTGCCATCG CACCTACCGT TGGGTTCTCC GTGCAGGTGA TCAAAGGCAC CGCGCTGGCG 
TCGATTATCG GGTTTATCGA ACTGACCAAA GCGGGAACCA TGTTGAATAA CGTGACCTAT 
CAGCCGTTTA AAGTGTTCGG ATTGGTGGCG CTGGGCTATT TCCTGATGTG CTATCCGCTC 
TCTTACTACA GCCGCTATCT GGAGAAGAAA TTCAATGCCG CTCATCACCA TTAA 

 

Protein sequence

MTFTDWDIVR NLLLAARWTL LLSLTAFIGG ALVTFPLMLL RLTKRKWATR FVHLYSELFQ 
GTPLLMQLFL AFFGLALFGI DVSPWTAAAL ALTLFTSAFL VDIWCGSVEA LPKGQWEASR 
CLGLDFGQTL YRVIAPQAMR IAIAPTVGFS VQVIKGTALA SIIGFIELTK AGTMLNNVTY 
QPFKVFGLVA LGYFLMCYPL SYYSRYLEKK FNAAHHH