Gene Pecwa_3466 details

Gene Information

• Locus tag: Pecwa_3466
• ID: 8531886
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3810928
• End bp: 3811671
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 56%
• Product: ABC transporter related protein
• Protein accession: YP_003260810
• Protein GI: 261822704

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCTCA TCACCATTAA TCAGGTTCAA AAATATTACG GCCAGAACCA TGTCCTGAAA 
GGGGTGGATC TGGATATCGA AATGGGTGAG GTTATTTCGA TCATCGGGCG CAGCGGTTCG 
GGTAAGAGCA CATTACTGCG TTGCATGAAC GGTCTGGAAG GCTATCAGGA CGGCAGTATC 
AAGCTGGGCG GGGTGACGGT CACCGACAGG GATTCGCAGG CGCGCGAGAT CAGCCGCTCG 
GTCGGGATGG TGTTCCAGAA CTTCAATCTG TTTCCGCACA TGACGGCGCT GGAAAACGTG 
ATGCTGGCGC CGCGCCGCGT GCTGGGTAAA AGCGCGGCGG AGTGTCAGGC GTTAGGCGAA 
CAGATGCTTA ACAAGGTCGG GCTGGGTGAA CGCCTTCATT ATTATCCCGG CAGCCTGTCG 
GGCGGTCAGC AGCAGCGCGT CGCCATTGCC CGCGCATTGG CGATGAATCC AAAAGTCCTG 
CTGTGTGACG AAATTACCTC GGCACTCGAT CCTGAACTCG TCGGCGAAGT GTTGAAGGTG 
TTGGAACAGC TTGCCGCAGA AGGCATGACG CTGATTCTGG TCACGCATGA AATGAATTTT 
GCCCGCGAAG TGGGCGACCG CGTGGTGTTT ATGCATCAGG GCACCGTCTG GGAGCAGGGC 
GACAGTAAAA CGCTGTTCGC TAACCCGCAG ACCCGCGAGT TGAAACAGTT TATCGCCTCG 
GTACGAGGAT TATCGGAAGC GTAA 

 

Protein sequence

MPLITINQVQ KYYGQNHVLK GVDLDIEMGE VISIIGRSGS GKSTLLRCMN GLEGYQDGSI 
KLGGVTVTDR DSQAREISRS VGMVFQNFNL FPHMTALENV MLAPRRVLGK SAAECQALGE 
QMLNKVGLGE RLHYYPGSLS GGQQQRVAIA RALAMNPKVL LCDEITSALD PELVGEVLKV 
LEQLAAEGMT LILVTHEMNF AREVGDRVVF MHQGTVWEQG DSKTLFANPQ TRELKQFIAS 
VRGLSEA