Gene Pecwa_3418 details

Gene Information

• Locus tag: Pecwa_3418
• ID: 8531836
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3752619
• End bp: 3754772
• Gene Length: 2154 bp
• Protein Length: 717 aa
• Translation table: 11
• GC content: 53%
• Product: ornithine decarboxylase
• Protein accession: YP_003260763
• Protein GI: 261822657

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.18204
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGT TAAAAATTGC GGCAAATGCA GCGGTTGCCA CCCGTTTAAT CACAACGCGC 
GAGATTGTCG CGTTGAGTCA GACTGACTTC ACCGATGTGG CGGCAGTTGT CGTCTCTATT 
GAAGAAGCCC GTAGCGGTAT TTTATCGATA TTGCAGCACA CCGGTTTTAG CATTCCGGCG 
TTTGTCGAAG AGCCTGATGA AGATAAAGAG TCAGATGTTC TGCCTGCGGG CAGCGAATGG 
CTGATTCTCG ATGATGAAGG TGAGCATGCC AGCGTGCTGG AACGTGCGGC GAAAGCCTAT 
CAGGATGCGC TGCTGCCGCC GTTTTTCGAT ACGCTGACCA AGTACGTCAA AATGAAAAAT 
ACGACGTTTG CCTGCCCCGG ACATCAGGGC GGTCAGTTCT TTCGTAAGCA TCCGGCAGGG 
CGCCAGTTTT TTGAGTTTTA CGGTGAGAAC GTTTTCCGTT CGGATATCTG TAACGCTGAC 
GTCAAACTGG GTGATTTGCT GATTCATGAA GGGGCGGCGA AGAAGGCACA GAAGCACGCT 
GCGCGGGTAT TTAACGCTGA TAAAACCTAT TTTGTGTTGA ACGGCACCTC CTCTGCGAAC 
AAAGTGGTGA CGAACGCGCT GCTGGCGCGT GGCGATCTGG TGCTGTTTGA CCGTAACAAC 
CATAAATCCA ACCATCACGG TGCGCTGATT CAGGCAGGGG CGACGCCGGT CTATCTGGAA 
ACTGTGCGCA ATCCGTTCGG CTTTATCGGC GGTGTGGATG CGCACTGCTT TGATGAAGCC 
TATCTGCGTA AGCTGATTGC GGAAGTGGCG CCGGAACGTG CCAACGAGCA ACGTCCGTTC 
CGTCTCGCGG TGATCCAACT CGGCACCTAT GACGGCACGA TTTATAACGC ACGTCAGGTC 
GTCGATAGCA TTGGGCACCT GTGTGACTAC ATCCTGTTTG ACTCGGCCTG GGTTGGTTAC 
GAGCAATTTA TCCCGATGAT GGAACAGTGC TCGCCGCTGT TGCTGGATCT GAACGAAAAC 
GATCCGGGTA TCTTCGTCAC CCAGTCGGTG CATAAGCAGC AGGCGGGCTT CTCCCAAACT 
TCGCAGATCC ACAAAAAAGA TACGCATATC AAAGGGCAGC GTCGTTTCTG TAACCATAAG 
CAGTTGAATA ACGCCTTTAT GCTGCATGCG TCGACCAGCC CGTTTTACCC GCTGTTCGCC 
GCGTTGGATG TCAATGCCAA AATGCACGAA GGGGCCAGCG GGCGTCGTAT GTGGATGGAT 
TGCGTGAAGC TGGGCATTGA AGCGCGTAAG CAACTGTTGA CGCGCTGTTC GCTCATCAAA 
CCGTTCGTAC CCGTAACGGT GGGCGGTGCG CTCTGGCAGG ATCACGATAC GGAAACGATC 
GCGCAGGACG TGCGTTTCTT CAATTTTGAG CCGGGCGAGA AATGGCACGC GTTTGAAGGA 
TACGCAGAGG ATCAGTATTT TATCGATCCC TGCAAATTGT TGCTGACTAC GCCGGGTATT 
GATGCGATTA GCGGCGATTA CACCGAATTT GGTATTCCGG CGACGATCCT TGCCAACTAT 
CTGCGTGAGC ATGGAATTAT CCCTGAAAAA TGCGATATGA ACTCGATTCT GTTCCTGCTA 
ACGCCAGCGG AAGACGCTGT AAAAATGCAG GAACTGGTGA ATGCGCTGGT GCATTTTGAA 
ACGCTGATTG CCCGTGATGC GCCGCTGAGT GAAGTGCTGC CCAGCCTGTA TCAGAAATAC 
AAAGAGCGTT ACCGTGGTTA CCGACTGCGT CGGTTGTGCC AGGAAATGCA TGATTTTTAC 
GCCCAGCACA ATGTGAAAGA TCTGCAAAAA GCGATGTTCC GCAAAACCGA GTTTCCGTCC 
GTGGTGATGT TGCCACAGGA TGCCAACAGG GAATTTGTAC GCGGGAATAT TGAGCTTATT 
CCTATCGATG AAGCGGAAGG ACGTATCGCG GCAGAAGGGG CATTGCCGTA TCCACCGGGC 
GTACTGTGTG TGGTGCCTGG GGAAAGCTGG GGCGGGGCGG TACAGCGTTA TTTTCTGGCG 
TTGGAAGATG GGATTAACCT GCTGCCCGGT TTTTCACCAG AATTGCAGGG GGTTTACAGC 
GTTGCGGAAG AAGATGGCAG CAAACGGCTG TACGGCTACG TAGTAGAAAA ATAA 

 

Protein sequence

MKQLKIAANA AVATRLITTR EIVALSQTDF TDVAAVVVSI EEARSGILSI LQHTGFSIPA 
FVEEPDEDKE SDVLPAGSEW LILDDEGEHA SVLERAAKAY QDALLPPFFD TLTKYVKMKN 
TTFACPGHQG GQFFRKHPAG RQFFEFYGEN VFRSDICNAD VKLGDLLIHE GAAKKAQKHA 
ARVFNADKTY FVLNGTSSAN KVVTNALLAR GDLVLFDRNN HKSNHHGALI QAGATPVYLE 
TVRNPFGFIG GVDAHCFDEA YLRKLIAEVA PERANEQRPF RLAVIQLGTY DGTIYNARQV 
VDSIGHLCDY ILFDSAWVGY EQFIPMMEQC SPLLLDLNEN DPGIFVTQSV HKQQAGFSQT 
SQIHKKDTHI KGQRRFCNHK QLNNAFMLHA STSPFYPLFA ALDVNAKMHE GASGRRMWMD 
CVKLGIEARK QLLTRCSLIK PFVPVTVGGA LWQDHDTETI AQDVRFFNFE PGEKWHAFEG 
YAEDQYFIDP CKLLLTTPGI DAISGDYTEF GIPATILANY LREHGIIPEK CDMNSILFLL 
TPAEDAVKMQ ELVNALVHFE TLIARDAPLS EVLPSLYQKY KERYRGYRLR RLCQEMHDFY 
AQHNVKDLQK AMFRKTEFPS VVMLPQDANR EFVRGNIELI PIDEAEGRIA AEGALPYPPG 
VLCVVPGESW GGAVQRYFLA LEDGINLLPG FSPELQGVYS VAEEDGSKRL YGYVVEK