| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3403 |
|---|
| Symbol | tas |
|---|
| ID | 8531821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3738329 |
|---|
| End bp | 3739390 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | putative aldo-keto reductase |
|---|
| Protein accession | YP_003260748 |
|---|
| Protein GI | 261822642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000401473 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATATC ACCGTATTCC CCATAGTTCT TTAGAAGTGA GCGTGCTGGG TCTTGGTACG
ATGACCTTTG GCGAACAGAA CAGCGAAGCA GACGCTCATG CCCAGTTAGA TCACGCCATT
GCCGCAGGTG TTAACCTGAT TGACACAGCA GAAATGTACG CCGTTCCTCC ACGCCCGGAA
ACGCAAGGGT TAACCGAGAG CTATATCGGG TCCTGGCTAA AATCTCGTGG CGGACGCGAG
AAATTAATTG TGGCGAGTAA AGTCTCAGGC CCTGTGCGCG GCAACGATCA CAGCATTCGC
CCACAGCAGG CGTTGGACAG AAAAAACATC CGTGCCGCGC TGGATGCCAG CCTGCAACGC
CTGAATACTG ACTATATCGA TCTCTACCAG TTGCATTGGC CACAGCGCCA GACCAACTGC
TTTGGCAAGC TGAACTATCA ATATACCGAT GACAAACCGC AATATACCGA CGACAAACCG
GTAGTAACAC TGTTGGAAAC GCTAGAAGCG CTGAATGAAC AGGTACGCGC CGGTAAGATC
CGCTATATCG GCGTGTCCAA CGAAACCCCA TGGGGCGTGA TGCGCTACCT GAATTTGGCG
GAAAAACACG ATCTGCCACG TATCGTATCG ATCCAAAACC CCTATAGTCT GCTGAACCGC
AGTTTTGAAG TTGGTCTGGC AGAAATCAGC CAGCATGAAG GCGTGGAACT TCTCGCCTAT
TCAGCGCTGG CGTTCGGTAC GCTGACGGGC AAGTATCTGA ATGGCGCGAA ACCCACTGAC
GCACGTAACA CGCTATTCAG CCGCTTCACA CGTTATACTG GCCCACAGGC TCAGGCAGCA
GTTGCCGAGT ACGTCGCTCT GGCACAAAAA CATGGTTTGA ACCCGGCGCA AATGGCATTG
GCGTTTGTGC GTCAACAGCC TTTCGTTGCC AGTACGCTGC TGGGTGCGAC CACACTGGAG
CAGTTGCAAA TCAACCTCGA CAGCCAGAAC CTGACGCTGG ACGGCGAGAT CCTTGACGAA
CTGGAAGCCA TCCACCGCCG TTTCACATTC CCGGCACCGT AA
|
|---|
| Protein sequence | MQYHRIPHSS LEVSVLGLGT MTFGEQNSEA DAHAQLDHAI AAGVNLIDTA EMYAVPPRPE
TQGLTESYIG SWLKSRGGRE KLIVASKVSG PVRGNDHSIR PQQALDRKNI RAALDASLQR
LNTDYIDLYQ LHWPQRQTNC FGKLNYQYTD DKPQYTDDKP VVTLLETLEA LNEQVRAGKI
RYIGVSNETP WGVMRYLNLA EKHDLPRIVS IQNPYSLLNR SFEVGLAEIS QHEGVELLAY
SALAFGTLTG KYLNGAKPTD ARNTLFSRFT RYTGPQAQAA VAEYVALAQK HGLNPAQMAL
AFVRQQPFVA STLLGATTLE QLQINLDSQN LTLDGEILDE LEAIHRRFTF PAP
|
|---|
| |