Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3400 |
Symbol | |
ID | 8531818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3737103 |
End bp | 3737795 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | DNA mismatch repair protein |
Protein accession | YP_003260745 |
Protein GI | 261822639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00030218 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAC CCTCGGTTCA CGCCACAGCA CCACAAAATG AACAAGCCTT GCTGGAACGT GCGCAATCCC TCGCAAGTTA TAATCTCGCG GAATTAGCGG ACATTGCCCG CCTCCCCCTT CCCGCCAACC TGAAACGCGA TAAAGGCTGG ATTGGCATGT TGCTGGAACG TTTTCTGGGC GCAAGCGCAG GAAGTAAGCC TGAGCAGGAT TTTCCTGATA TTGGCATTGA GCTAAAAACT ATCCCTATTG ATGAACAGGG CAAACCGCTG GAAACCACCT TCGTCTGTGT CGCACCGTTG ACAGGCAACA GCGGCGTGAC GTGGGAAAGC AGTCACGTGC GGCATAAGCT CGCTCGGGTA CTGTGGATTC CGGTGGAAGG CTCGCGTCAC ATCCCGCTGG GGGAACGCCG TATTGGTACA CCACTGATGT GGAGCCCCAA TGAAGAAGAA GAAGAGCAAC TACGCTGTGA TTGGGAAGAG CTGATGGATC TGATCGTACT TGGCAAGGTA GAAAGCATCA CCGCCCGACA TGGTGAAGTG CTGCAATTAC GCCCCAAGGC AGCAAATAGC CGGGCATTAA CAGAGGCGAT TGGCGAATTT GGTCAACCGA TTTTGACCCT ACCACGCGGG TTCTATCTGA AGAAAACCTT TACTGCGCCA CTGCTGGCCC GCCACTTTAT GCAAGTCGAG TGA
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Protein sequence | MNSPSVHATA PQNEQALLER AQSLASYNLA ELADIARLPL PANLKRDKGW IGMLLERFLG ASAGSKPEQD FPDIGIELKT IPIDEQGKPL ETTFVCVAPL TGNSGVTWES SHVRHKLARV LWIPVEGSRH IPLGERRIGT PLMWSPNEEE EEQLRCDWEE LMDLIVLGKV ESITARHGEV LQLRPKAANS RALTEAIGEF GQPILTLPRG FYLKKTFTAP LLARHFMQVE
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