Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3396 |
Symbol | thyA |
ID | 8531814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3731689 |
End bp | 3732483 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | thymidylate synthase |
Protein accession | YP_003260741 |
Protein GI | 261822635 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0862662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAGT ATCTGGATCT GATGAACAAA GTGCTTGAAG AGGGTACGCC GAAGGCCGAC CGTACTGGTA CGGGAACGCG TTCTATTTTC GGCCATCAGA TGCGTTTCAA CTTGCAGGAC GGATTTCCGC TGGTTACCAC CAAAAAATGC CACCTGCGTT CGATTATCCA TGAATTGCTC TGGTTCCTGA ATGGGGATAC CAATGTTGCT TATCTGAATG AAAATAAAGT CAGTATTTGG GACGAATGGG CAGATGAGAA CGGCGATTTG GGACCGGTTT ACGGCAAGCA GTGGCGTTCG TGGGGAGCGG CTGACGGTCG TCAGATCGAC CAACTGAAGA ATGTTCTGAC CCAGTTGAGA CAAGATCCAG ATTCTCGCCG TATCATCGTT TCTGCCTGGA ACGTGGGTGA ACTGGACAAA ATGGCGTTGG CACCATGCCA CGCGTTTTTC CAGTTCTACG TGGCAGATGG CAAACTCTCT TGCCAACTTT ATCAGCGTTC ATGCGATATC TTCCTCGGCT TGCCGTTCAA CATCGCCAGC TATGCGTTGC TGGTACATAT GGTGGCGCAG CAGTGCGATC TGGAGGTCGG CGATTTCGTC TGGACTGGCG GCGACACGCA TCTGTACAAC AACCATATGG AACAGACGCA TTTACAGTTG AGCCGTGAAC CGCGCGCGCT ACCTAAACTG GTGATTAAGC GCCGCCCGGA TACGCTGTTC GACTATCGCT TCGAAGACTT TGAAATCGAG GGATACGATC CGCATCCCGC CATCAAAGCA CCGGTTGCGA TCTAA
|
Protein sequence | MKQYLDLMNK VLEEGTPKAD RTGTGTRSIF GHQMRFNLQD GFPLVTTKKC HLRSIIHELL WFLNGDTNVA YLNENKVSIW DEWADENGDL GPVYGKQWRS WGAADGRQID QLKNVLTQLR QDPDSRRIIV SAWNVGELDK MALAPCHAFF QFYVADGKLS CQLYQRSCDI FLGLPFNIAS YALLVHMVAQ QCDLEVGDFV WTGGDTHLYN NHMEQTHLQL SREPRALPKL VIKRRPDTLF DYRFEDFEIE GYDPHPAIKA PVAI
|
| |