| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3377 |
|---|
| Symbol | |
|---|
| ID | 8531792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3703310 |
|---|
| End bp | 3704233 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | DNA-binding transcriptional activator GcvA |
|---|
| Protein accession | YP_003260722 |
|---|
| Protein GI | 261822616 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.649245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC GTCTACCTCC GCTCAACGCA TTGCGCGTTT TTGATGCGGC GGCTCGCCAT
TTAAGTTTTA CCAAAGCGGC AGAAGAATTG TTTGTTACGC AGGCTGCCGT CAGCCACCAA
ATTAAATCTC TGGAAGATTT CCTAGGGCTT AAATTATTCC GCCGTCGTAA TCGTTCCCTG
CTACTGACGG AAGAAGGGCA AAGTTACTAC CTTGATATCA AAGAGATCTT CTCATCGTTG
AATGACGCGA CGCGTAAGCT GCAATCCCGC AGCGCGAAAG GCGCATTAAC GGTCAGCCTG
CTACCCAGTT TCGCTATTCA TTGGCTGGTT CCGCGTCTTT CGAGCTTTAA CTCCGACTAT
CCGGGGATTG ATGTTCGTAT TCAGGCGGTG GATCGTGATG AAGATCGTCT GGCGGATGAT
GTGGATGTCG CGATTTTTTA TGGTCGAGGA AACTGGCCGG GATTGCGGGT GGAAAAACTG
TACGCTGAAT ATCTCTTGCC GGTTTGCTCA CCGGTATTGC TGACGGGGAA TCATCCACTG
AAGACACCGG ATGACCTGGT GGCACACACT CTGCTGCACG ATGCATCGCG CCGTGACTGG
CTGTCCTATA CGCGTCAGCT TGGGGTGCAG ATTAATGTGC AGCAAGGGCC AATTTTCAGC
CATAGCGCGA TGGTGTTGCA GGCGGCGATC CACGGGCAGG GCGTGGCGCT GGCGAATAAT
GTGATGGCGC AGACGGAACT CGAAGCTGGG CGACTGGTGT GTCCGTTTAA CGATGTGTTG
GTGAGCCGGA ATGCTTTTTA TCTGGTATGT CATGACAGTC AGGCAGAACT GGGTAAAATA
GCCGCCTTTC GCCACTGGAT TCTGGCGCGG GCGGCTAGCG AGCAGGAAAA ATTTCGCTTC
CGCTATGACA GCGGTACGCG CTGA
|
|---|
| Protein sequence | MSKRLPPLNA LRVFDAAARH LSFTKAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL
LLTEEGQSYY LDIKEIFSSL NDATRKLQSR SAKGALTVSL LPSFAIHWLV PRLSSFNSDY
PGIDVRIQAV DRDEDRLADD VDVAIFYGRG NWPGLRVEKL YAEYLLPVCS PVLLTGNHPL
KTPDDLVAHT LLHDASRRDW LSYTRQLGVQ INVQQGPIFS HSAMVLQAAI HGQGVALANN
VMAQTELEAG RLVCPFNDVL VSRNAFYLVC HDSQAELGKI AAFRHWILAR AASEQEKFRF
RYDSGTR
|
|---|
| |