| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3363 |
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| Symbol | dapD |
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| ID | 8531778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3691100 |
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| End bp | 3691927 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_003260708 |
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| Protein GI | 261822602 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.952326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAC AATTACAGAA CATCATTGAA ACGGCTTTCG AGCGCCGCGC AGAAATCACT
CCGGCAAACG CAGACACCGT CACGCGTGAA GCCGTTACTC AGGCCATCAG CCTGTTAGAT
AGCGGCGCCC TGCGCGTTGC AGAAAAAATC GACGGCCAGT GGGTTACCCA TCAGTGGCTG
AAGAAAGCCG TGCTGCTCTC TTTCCGTATT AATGATAACC ACCTTATCGA AGGCGGAGAA
ACACGCTTTT TCGACAAAGT GCCAATGAAA TTTGCTGACT ATGATGAAGC GCGTTTCCAG
CGTGAAGGCG TGCGCGTTGC ACCGCCAGCC AGCGTGCGTC GCGGTGCCTA TATCGCACGT
AATACCGTGC TGATGCCGTC TTACGTCAAC ATCGGTGCTT ATGTCGACGA AGGCACTATG
GTGGATACGT GGGTAACCGT TGGTTCCTGC GCCCAAATCG GTAAAAATGT TCACCTGTCC
GGCGGTGTCG GTATCGGTGG CGTTTTGGAA CCGTTACAGG CTAACCCAAC CATCATTGAA
GACAACTGCT TCATCGGTGC GCGTTCTGAA GTAGTAGAAG GCGTTGTCGT TGAAGAAGGT
TCGGTCATCT CCATGGGCGT GTTCATCAGC CAAAGCACTC GTATTTACGA TCGTGAAACC
GGTGAAATTC ACTATGGCCG TGTGCCCGCT GGCTCCGTCG TGGTTTCCGG CAACCTGCCG
TCCAAAGATG GTAGCCACAG CATGTACTGT GCCATCATTG TGAAGAAAGT GGATGCGAAA
ACCCGCGGTA AAGTGGGCAT CAATGAGTTA TTACGCTCCA TCGACTAA
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| Protein sequence | MHQQLQNIIE TAFERRAEIT PANADTVTRE AVTQAISLLD SGALRVAEKI DGQWVTHQWL
KKAVLLSFRI NDNHLIEGGE TRFFDKVPMK FADYDEARFQ REGVRVAPPA SVRRGAYIAR
NTVLMPSYVN IGAYVDEGTM VDTWVTVGSC AQIGKNVHLS GGVGIGGVLE PLQANPTIIE
DNCFIGARSE VVEGVVVEEG SVISMGVFIS QSTRIYDRET GEIHYGRVPA GSVVVSGNLP
SKDGSHSMYC AIIVKKVDAK TRGKVGINEL LRSID
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