| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3362 |
|---|
| Symbol | |
|---|
| ID | 8531777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3688360 |
|---|
| End bp | 3691071 |
|---|
| Gene Length | 2712 bp |
|---|
| Protein Length | 903 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_003260707 |
|---|
| Protein GI | 261822601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA AACGCTTTTC ACCAGACAAG ACGCCACCTG ATGCGTCCTC ACCCGACAGC
CCTGTAGACG CCATTGCAGC ACAGCCCCCT GCTTCACCGC TGACCTACGC CGATGACATG
TTGAACTGTC AGGCGTTGAA ACAGCAGTTG GAGCTATTCC AGCTCTGGCT CGGTTCAGAA
TTTCGTTCCG GCGTCAGTGC GGAAAAGCTG ATTGATGCCA GAACCTTATT CATCGATCGC
CTGTTGCAGC GGCTGTGGTA CTTCCACGGT TTTGAGAATA TTGCACAAAC CGCACTCGTT
GCGGTTGGTG GGTATGGCCG CGGTGAATTG CACCCACTTT CCGATATCGA CGTGCTGGTA
TTGAGCCAGA CAGAACTTAG TGAGGAACAT TCCCAGCGCG TCGGCCAATT CATTACCCTA
CTGTGGGATT TAAAGCTGGA AGTCGGCCAT AGCGTCAGAA CGTTGGAAGA GTGCTTGCAA
GAAGGGCGTG CGGATATCTC TGTCGCGACC AACCTGATTG AATCCCGCAT GATATGCGGC
GATGTTGCCC TATTTCTCAC GCTGCAAAAA CACGTCTTCA GTGATGAATT TTGGCCGTCC
TCCACGTTTT TCCCAGCAAA AATTGTCGAA CAACAGGAAC GCCATCAACG CTATCACAGC
ACCAGCTACA ACCTGGAACC CGATATCAAG AGCAGTCCAG GTGGGCTACG CGATATTCAT
ACGCTGCTGT GGGTGGCAAG ACGCCACTTC GGCGCAACGT CGCTCAACGA AATGGTGGGT
TTCGGCTTTC TGACAGAGGC CGAGCGTAAA GAGCTTAACG AATGCCAGAG CTTTTTGTGG
CGTATCCGCT TTGCTCTGCA TCTGATCCTG CCGCGTTACG ACAACCGACT GCTGTTCGAC
AGACAGCTTA ACGTCGCGCA ACTGTTGCAG TATCAGGGCG AAGGTAACAC GCCAGTCGAG
CGCATGATGA AAGACTTCTA CCGCATGACG CGTCGCGTCA GCGAGTTGAA CCAGATGCTG
TTACAACTCT TTGACGAAGC GATTCTGGCG CTGGATGCGA GTGAAAAACC CCGCCCGATA
GACGATGAAT TCCAGCTACG CGGCAATCTG GTAGACCTGC GTGATGAAAA CTTGTTTATC
AAAAAGCCAG AAGCCATCAT GCGTATGTTC TACCTGATGG TGCGCAACCG CGACATCAGC
GGCATTTATT CCACCACATT GCGCCAGTTG CGCCATGCAC GTCGCCATCT CGCCAGCCCG
CTTTGTACCA TCCCAGAAGC ACGCCAGTTG TTCATGAATA TTCTGCGCCA TCCGCATGCG
GTAAGCCGTG CGCTGCTGCC GATGCACCGT CATAGCGTGC TGTGGGCCTA TATGCCGCTA
TGGGGGAATA TTGTTGGTCA GATGCAGTTC GATCTGTTTC ACGCCTATAC GGTGGATGAG
CACACGATCC GCGTTCTGCT CAAGCTGGAA AGCTTCGCCG ACGAGAATAC GCGACCACTG
CATCCGCTGT GCGTAGAGCT CTACCCTCGC CTGCCTCAGC CTGAATTATT ACTGCTGGCC
GCGCTGTTCC ACGATATCGC CAAAGGCCGT GGGGGCGATC ACTCTGAATT GGGTGCGCAG
GACGTACTGG AATTTACCGC GCTGCACGGG CTGAACTCGC GCGAAGCCCA GTTGGTGTCC
TGGCTGGTAC GCTGCCACTT GCTGATGTCC GTCACCGCAC AGCGCCGCGA TATTCAAGAT
CCCACGGTTA TTCAGCAATT TGCTACGGAA GTACAAAGCG AAACCCGCTT ACGCTATCTG
GTCAGCCTGA CGGTTGCGGA TATCTGCGCC ACTAATGAAA CGCTGTGGAA CAGTTGGAAG
CAAAGTCTGT TGCGGGAACT CTATTTTGCT ACCGAGAAAC AGCTACGCCG TGGCATGCAA
AATACGCCGG ATTTACGTGA ACGCGTCCGG CATCATCGCT TGCAGGCGCT GGCTCTGCTG
CGCATGGATA ACATTGACGA AGAGGCGTTG CACCACATCT GGAGCCGCTG TCGGGCCGAT
TATTTCCTGC GCCACTCACC GAACCAGCTT GCCTGGCACG CGCGCCACCT GCTGGAGCAT
GATACCGACA AACCGCTGGT GCTAATCAGC CATCAGGCCA GTCGTGGCGG CACCGAGATT
TTTATCTGGA GCCCGGACAG GCCTTATCTT TTCGCGGCCG TCGCCGGTGA ATTAGACCGA
CGTAACCTCA GCGTGCACGA CGCACAGATT TTTACCAGCC GCGACGGCAT GGCGATGGAT
ACGTTTATCG TGCTAGAACC GGATGGCAGC CCGCTGGCGC AGGATCGGCA TGAAATGATA
CGCCAGGCGC TGGAGCAGTC GCTGACCCAC CGACACTACC AGCATCCACG GGTGCGTAGG
CCGTCGCCTA AACTACGTCA CTTCAGCGTG CCAACCGAAG TCAACTTCCT GCCGACGCAT
ACGGACAGAC GCAGCTACAT GGAGCTCAGC GCACTCGATC AACCGGGGCT GTTGGCACGA
ATCGGCGAGA TTTTTGCCGA TCTTAATCTG TCGCTGCATG GCGCACGTAT TTCGACAATC
GGCGAACGGG TGGAAGATCT TTTCATCCTG GCCGACAGCG ACAGGCGAGC ATTGAAGCCG
GATTTGCGCC TTAAATTGCA AGAACGGTTG ACAGAAGCCC TTAACCCAAA CGATAAAGTA
CCATTGAGTT AA
|
|---|
| Protein sequence | MTDKRFSPDK TPPDASSPDS PVDAIAAQPP ASPLTYADDM LNCQALKQQL ELFQLWLGSE
FRSGVSAEKL IDARTLFIDR LLQRLWYFHG FENIAQTALV AVGGYGRGEL HPLSDIDVLV
LSQTELSEEH SQRVGQFITL LWDLKLEVGH SVRTLEECLQ EGRADISVAT NLIESRMICG
DVALFLTLQK HVFSDEFWPS STFFPAKIVE QQERHQRYHS TSYNLEPDIK SSPGGLRDIH
TLLWVARRHF GATSLNEMVG FGFLTEAERK ELNECQSFLW RIRFALHLIL PRYDNRLLFD
RQLNVAQLLQ YQGEGNTPVE RMMKDFYRMT RRVSELNQML LQLFDEAILA LDASEKPRPI
DDEFQLRGNL VDLRDENLFI KKPEAIMRMF YLMVRNRDIS GIYSTTLRQL RHARRHLASP
LCTIPEARQL FMNILRHPHA VSRALLPMHR HSVLWAYMPL WGNIVGQMQF DLFHAYTVDE
HTIRVLLKLE SFADENTRPL HPLCVELYPR LPQPELLLLA ALFHDIAKGR GGDHSELGAQ
DVLEFTALHG LNSREAQLVS WLVRCHLLMS VTAQRRDIQD PTVIQQFATE VQSETRLRYL
VSLTVADICA TNETLWNSWK QSLLRELYFA TEKQLRRGMQ NTPDLRERVR HHRLQALALL
RMDNIDEEAL HHIWSRCRAD YFLRHSPNQL AWHARHLLEH DTDKPLVLIS HQASRGGTEI
FIWSPDRPYL FAAVAGELDR RNLSVHDAQI FTSRDGMAMD TFIVLEPDGS PLAQDRHEMI
RQALEQSLTH RHYQHPRVRR PSPKLRHFSV PTEVNFLPTH TDRRSYMELS ALDQPGLLAR
IGEIFADLNL SLHGARISTI GERVEDLFIL ADSDRRALKP DLRLKLQERL TEALNPNDKV
PLS
|
|---|
| |