| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3350 |
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| Symbol | lpxD |
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| ID | 8531765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3675033 |
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| End bp | 3676055 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_003260695 |
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| Protein GI | 261822589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000694065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCGA TTCGACTGGA CGCGTTAGCT CAACAGTTGG ATGCACAATT ACACGGTGAT
GGCGATATCG TCATCACCGG TGTGGCGTCT ATGCATTCGG CAAAAACTGG GCAAATTACG
TTTCTTTCTG ACAGTCGTTA CCGTGAGCAA CTGGCCGAGA CACAAGCGTC TGTCGTCGTG
CTGACGGAAG CAGATTTACC TTACTGTCAG GTTGCTGCGC TGGTAGTGAA AAATCCTTAT
CTGACCTATG CGCGCATGGC TCAGTTGCTG GATACGACGC CGCAACCGGC AACCGATATC
GCCCCGAGTG CCGTCATTGC TCCCGATGCG ACGCTGGGTC AGCAGGTATC CGTTGGTGCA
AATGCTGTCA TCGAATCTGG CGCTCAGTTG GGTGATGGTG TTGTCATCGG CCCCGGCTGT
TTTGTCGGTA AAAACGCCCG CATTGGTGCC GGCACCCGTT TGTGGGCAAA TGTAACGATT
TACCACCGCG TTGAGCTTGG TGAACAGTGT CTGATCCAGT CTGGCACGGT GATCGGTTCT
GACGGCTTTG GCTATGCCAA CGATCGTGGC AACTGGGTGA AGATCCCGCA GTTGGGAACG
GTCAGAATTG GCGATCGGGT TGAGATTGGT GCGAGCACGA CTATCGATCG TGGTGCGTTG
GATGATACGG TCATTGGCAA TGGTGTTATC ATTGATAACC AATGTCAGAT TGCGCACAAC
GTCGTGATTG GCGACAATAC CGCGGTCGCG GGTGGCGTCA TTATGGCGGG GAGCTTGAAA
ATTGGCCGTT ATTGCATGAT CGGCGGTGCT AGCGTGATTA ACGGGCACAT GGAGATCTGC
GATAAAGTGA CGGTAACGGG GATGGGAATG GTCATGCGAC CAATCACTGA ACCTGGGGTA
TACTCTTCGG GTATTCCTTT GCAACCCAAT AAAGTATGGC GCAAAACTGC AGCGCTGGTG
ATGAATATTG ATGAGATAAG CAAACGGTTA AAAGCCGTTG AACGAAAAGT CGATAACGTT
TAA
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| Protein sequence | MYSIRLDALA QQLDAQLHGD GDIVITGVAS MHSAKTGQIT FLSDSRYREQ LAETQASVVV
LTEADLPYCQ VAALVVKNPY LTYARMAQLL DTTPQPATDI APSAVIAPDA TLGQQVSVGA
NAVIESGAQL GDGVVIGPGC FVGKNARIGA GTRLWANVTI YHRVELGEQC LIQSGTVIGS
DGFGYANDRG NWVKIPQLGT VRIGDRVEIG ASTTIDRGAL DDTVIGNGVI IDNQCQIAHN
VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV
YSSGIPLQPN KVWRKTAALV MNIDEISKRL KAVERKVDNV
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