Gene Pecwa_3345 details

Gene Information

• Locus tag: Pecwa_3345
• Symbol: dnaE
• ID: 8531760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3668350
• End bp: 3671832
• Gene Length: 3483 bp
• Protein Length: 1160 aa
• Translation table: 11
• GC content: 54%
• Product: DNA polymerase III subunit alpha
• Protein accession: YP_003260690
• Protein GI: 261822584

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAAC CACGTTTTGT TCACCTGCGT GTTCACAGTG ACTATTCCAT GATCGATGGG 
CTGGCCAAAG TCGGTCCGCT GGTAAAAAAA GCGGCGGCGC TCGGTATGCC AGCGCTGGCG 
ATTACCGATT TTACCAACCT GTGTGGTCTG GTTAAATTTT ATGGCGGCGC GCATGGTGCG 
GGGGTCAAAC CTATCATCGG CGCAGACTTC TATGTCGAAA GCGATGAATT AGGAGATGAA 
CTGGCGCATC TCACGGTGCT TGCCATGAAC AATGAAGGCT ACCAGAATCT CACGCTGCTG 
ATTTCCCATG CTTACCAACG TGGCTATGGT GCTGCCGGGC CGACGATTGA CCGCGATTGG 
CTGATTGAAC ATCAGGAAGG GCTGATTCTT CTGTCTGGTG GCCGCCGGGG TGATGTTGGC 
CGGTTTTTGC TGCGTGGTAA TCAGGCACAG GCTGAACAGT GTGTGGCGTT CTATCAGGAA 
CACTTCCCCC AGCGTTATTA TCTGGAACTG ACCCGTACAT CGCGCCCTGA TGAAGAAAGC 
TACATACATT CAGCCGTGGA GTTGGCAACC AAGTACGGGT TACCCGTTGT AGCGACTAAT 
GAAGTGTGCT TTATCAGCAC TGATGATTTT GATGCTCACG AAATCCGTGT AGCCATTCAC 
GATGGCTACA CGCTTGACGA TCCCAAACGC CCACGTCATT ACAGCCCGCA GCAGTACATG 
CGCTCGGAAG AGGAAATGTG CGAGCTGTTT GCCGATATCC CCGAAGCGCT AGTGAACAGC 
GTTGAAATTG CTAAGCGCTG TAACGTAACG ATCCGCTTGG GTGAATATTT TCTGCCGCAG 
TTCCCTACGG GTGAGATGAG CACCGCAGAT TTTCTGGTTC AGTGCTCGAA AAAAGGGTTA 
GAGGATCGTC TCGAATTCCT GTTCCCTGAC CCGGAAGTGC GTGCGGCTCG TCGGCTGGAA 
TATGATGAGC GTCTGGATAT TGAGCTGGGC GTTATCAACC AAATGGGGTT TCCTGGCTAC 
TTCCTGATCG TCATGGAGTT TATCCAGTGG TCGAAGGATA ACGATGTGCC TGTTGGTCCA 
GGACGTGGTT CCGGTGCGGG CTCATTGGTC GCCTACGCGC TGAAAATTAC CGATCTAGAC 
CCGCTGGAGT TCGACCTGCT GTTCGAACGC TTCCTCAACC CTGAACGTGT CTCCATGCCT 
GACTTCGATG TCGATTTCTG TATGGAAAAA CGCGACAAGG TTATCGATCA CGTCGCGGAA 
ATGTACGGGC GTGATGCGGT CTCGCAGATT ATTACCTTTG GTACGATGGC GGCTAAAGCG 
GTGATTCGTG ACGTCGGGCG CGTGCTCGGA CACCCTTATG GGTTTGTCGA TCGTATTTCA 
AAACTGGTGC CGCCCGATCC GGGCATGACG CTGGAAAAGG CGTTTGCAGC CGAACCGCAG 
TTGCCAGAAA TTTATGAAGC CGATGAGGAA GTTAAGGCCC TTATCGATAT GGCCCGCAAA 
CTCGAAGGGG TCACGCGTAA CGCCGGTAAA CATGCTGGCG GGGTGGTGAT ATCCCCCACC 
AAGATTACTG ACTTCGCGCC GCTGTATTGT GATTCGGAAG GGAACCATCC GGTTACTCAG 
TTTGATAAAA ACGATGTGGA ATATGCCGGG CTGGTGAAAT TCGACTTCCT TGGCCTGCGT 
ACATTGACCA TCATCGACTG GGCACTGGAG ATGATCAACG CCCGTCGTGC GAAGCAAGGT 
CAGGAACCGA TTGATATCGC CGCGATCCCG CTCGACGATA AGAAAAGCTT CGACATGCTG 
CAACGCTCGG AAACCACGGC GGTATTCCAG CTTGAATCAC GCGGCATGAA AGACCTGATC 
AAACGTCTGA AGCCTGACTG TTTTGAAGAT ATGATCGCAC TGGTGGCGTT GTTCCGCCCC 
GGCCCGCTGC AATCCGGTAT GGTGGACAAC TTCATCGACC GTAAGCATGG GCGTGAAGCG 
ATTTCATATC CTGATATCGA ATGGCAGCAC GAGTCTCTCA AGCCTGTACT GGAGCCGACC 
TACGGCATCA TCCTGTATCA GGAACAGGTG ATGCAGATTG CGCAGGTTCT GGCGGGCTAT 
ACGCTGGGCG GCGCGGATAT GCTGCGTCGT GCGATGGGGA AAAAGAACCC CGTCGAGATG 
GCGAAGCAGC GCGGCGGCTT TGAAGATGGT GCCAAATCGC GCGGCGTGAA CGGTGAGCTG 
GCGGTTAAGA TTTTCGACCT GGTGGAAAAA TTCGCCGGTT ACGGCTTTAA TAAATCACAC 
TCCGCGGCTT ATGCGCTGGT GTCTTACCAA ACGCTGTGGC TGAAAGCGCA CTATCCGGCT 
GAATTCATGG CGGCGGTGAT GACGGCCGAT ATGGACAACA CGGATAAGGT GGTGGGGCTG 
GTTGATGAAT GCTGGCGGAT GGGGTTAAAA ATCCTGCCCC CGGACATCAA CAGCGGCCTG 
TACCACTTCC ACGTTAACGA CGATGGCGAG ATTGTTTACG GCATTGGCGC GATTAAAGGC 
GTCGGTGAAG GTCCGATTGA GGCGATTATT GAAGCGCGTA ATCAGGGCGG CTATTTTAGA 
GAGCTGTTTG ACCTCTGCGC GCGTACTGAC ATTAAAAAGC TGAACCGCCG TGTGCTGGAA 
AAGCTGATTA TGTCTGGGGC GTTTGACCGT CTTGGGCCGC ATCGCGCCGC GCTGATGAAC 
TCATTGGCTG ATGCGCTGAA GGCTGCCGAT CAGCATGCTA AAGCGGAAGC CATTGGTCAG 
GTGGATATGT TCGGCGTGCT GGCCGATGCG CCTGAGCAGG TGGAGCAATC CTACAGTACC 
GTGCCACCGT GGCCGGAACA GGTTGTGTTG GATGGTGAGC GGGAGACGTT GGGGCTGTAT 
CTGACCGGTC ACCCGATCAC GCAATATATT AAGGAAATTG AACGCTATGC CGGTGGTGTG 
CGTTTGAAAG ATATGCACCC GACGGATCGG GGTAAAATGA CCACTGCCGT TGGGCTGGTG 
TTGGCGGCTC GCGTCATGGT CACCAAACGG GGTAACCGTA TTGGTGTCTG TACATTGGAC 
GATCGTTCCG GTCGGCTTGA GATTATGCTG TTTACCGATG CATTGGAAAA ATATCAGCAT 
TTACTTGAGA AAGACCGTAT CCTTATCGCC AGTGGACAGG TCAGCTTTGA TGACTTCAGC 
GGCGGGCTTA AAATGACCGT CCGAGAGTTA ATGGATATCA GTGAAGCGCG GGAAAAATAC 
GCGCGCGGGC TTGCTATCTC GCTGACTGAC AGGCAAATTG ATGACCAGCT ATTAAACCGT 
CTCCGCCAAT CGTTGGAACC CCATCGATCG GGGACGATCC CAGTGCATCT CTATTACCAG 
CGTGAAGATG CGCGCGCCCG ACTACGTTTC GGCGCAGCAT GGCGTGTAAC GCCTGCCGAT 
ACGCTACTGA ACGAGCTGCG CACATTAGTG GGTAATGAGC AGGTGGAACT GGAATTTGAC 
TAA 

 

Protein sequence

MAEPRFVHLR VHSDYSMIDG LAKVGPLVKK AAALGMPALA ITDFTNLCGL VKFYGGAHGA 
GVKPIIGADF YVESDELGDE LAHLTVLAMN NEGYQNLTLL ISHAYQRGYG AAGPTIDRDW 
LIEHQEGLIL LSGGRRGDVG RFLLRGNQAQ AEQCVAFYQE HFPQRYYLEL TRTSRPDEES 
YIHSAVELAT KYGLPVVATN EVCFISTDDF DAHEIRVAIH DGYTLDDPKR PRHYSPQQYM 
RSEEEMCELF ADIPEALVNS VEIAKRCNVT IRLGEYFLPQ FPTGEMSTAD FLVQCSKKGL 
EDRLEFLFPD PEVRAARRLE YDERLDIELG VINQMGFPGY FLIVMEFIQW SKDNDVPVGP 
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMEK RDKVIDHVAE 
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLVPPDPGMT LEKAFAAEPQ 
LPEIYEADEE VKALIDMARK LEGVTRNAGK HAGGVVISPT KITDFAPLYC DSEGNHPVTQ 
FDKNDVEYAG LVKFDFLGLR TLTIIDWALE MINARRAKQG QEPIDIAAIP LDDKKSFDML 
QRSETTAVFQ LESRGMKDLI KRLKPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREA 
ISYPDIEWQH ESLKPVLEPT YGIILYQEQV MQIAQVLAGY TLGGADMLRR AMGKKNPVEM 
AKQRGGFEDG AKSRGVNGEL AVKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA 
EFMAAVMTAD MDNTDKVVGL VDECWRMGLK ILPPDINSGL YHFHVNDDGE IVYGIGAIKG 
VGEGPIEAII EARNQGGYFR ELFDLCARTD IKKLNRRVLE KLIMSGAFDR LGPHRAALMN 
SLADALKAAD QHAKAEAIGQ VDMFGVLADA PEQVEQSYST VPPWPEQVVL DGERETLGLY 
LTGHPITQYI KEIERYAGGV RLKDMHPTDR GKMTTAVGLV LAARVMVTKR GNRIGVCTLD 
DRSGRLEIML FTDALEKYQH LLEKDRILIA SGQVSFDDFS GGLKMTVREL MDISEAREKY 
ARGLAISLTD RQIDDQLLNR LRQSLEPHRS GTIPVHLYYQ REDARARLRF GAAWRVTPAD 
TLLNELRTLV GNEQVELEFD