| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3335 |
|---|
| Symbol | |
|---|
| ID | 8531750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3657435 |
|---|
| End bp | 3659057 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | EAL domain protein |
|---|
| Protein accession | YP_003260681 |
|---|
| Protein GI | 261822575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA ACCTGTTAGC TTGTTTTCAA ACGCTCTGTT TTAAGAAAGG TTTTTTCTTA
TTATTTTTCA GCCTATTTTT TATCCTAGCT TTGCTTTTTG CGCTGGTACT TGAGGTCCAC
TCGATTTTCA AACTCAAACA GTTTGAAGAG GATGTGGAGA CGTTTTCTAC TCTCACGCTT
GAACACGCTG GCGAAATAAT GGCGCAGGCG ACCTCCGCGC TGGATAAGTT AGAAGAATAC
CGTTTGCCTT ATTGCGAGGA TCCTCATCTG AATATGCTAC GCAAGGTGGC TTACGATAAT
GATTATATTC AGGACGTGGT CTATATCGAT GGGAATCGGC CGCGTTGTTC TTCGATGCTG
AACGACATTA ATACCTTATT TCTTCCCAAA CCCGATTTTG TTTATAAAAG CGTCTATGGC
GTTTGGTATA ATGTCGAAAG CCCGCTGAAC CGTAATAAGA GAATGATTTA TGTTGGCGCA
ACGCATCATT TTGTCGTGTT AAATCCGCGT TCATTTCTGG ATATTCCCTC CCATAGCCAT
AATATCCGAT GTACATTGCT GGAAAGAAAA AAAAAGAATG GACAGGTTAT CTTGTCGGAT
TCGATCGATG GTAGCGTTTT CCCTCGCCTG ATAACGGGAG AAAATCGAGC CGATAGATTT
TATATTGATA GTAAATATTA TGTTCTAAAA CCGCTATCAA ACAGCAATCT TGCTCTGGTG
GTGAGTGCAG ATAAACCCGT GAGTACTACC CGTTATCTGA CTATTTTTTT CTCCTCTTTG
CCCCTTTTTT TCCTCTTTTC CCTACTGCTT TCGACGTTGA TCTCTCGGCG AACACTGACT
ATCCAGAGTC CGCGTTATGT TCTTAATCAG GCACTGAAGC AAAAAGAGTT CAAATTGCAT
TATCAGCCGA TTATTGAACT GAATACCGCC CAGGTTGTGG GGTGTGAAGC GTTGATTCGC
TGGTGTCATT CGGACGGGCG CGTAATTATG CCGGACTCTT TTATTCCCAT GATTCGTCAG
GTGGGGTTGA TGAAAGCAAT GACGTTATAC GTCATTGATG AGGCGTTACA AACGGCCTGC
GTGCTGAAGA AAAGTTATCC TGAGATGTTT GTTTCTATCA ATCTTGAGGC TGCGGAATTT
GAAGATATTT CCATTTTCAA TTATCTCGTG GAGTATATTG CCGTACACGG TCTTGAAGGG
ACGAATATCA ATGTCGAATT AACCGAGTCA TCAATGATCG AACCACAAAA GGCCGGATTG
ATGGTGGAAT TGTACCAACA GAAAAGCATT GATGTTGCCA TTGACGATTT TGGTACTGGA
TATGCCGGGC TGTCGTATCT TGAACGGGTC AAAGCCAATA AGCTTAAAAT TGACAAATCT
TTTGTCTGGA ATATTAATAA TCATTCACCA GGCGACATTG TGCTGTCTCA TATCGTCAGC
ATGGCACATT GCCTTAACCA ACAAATTGTT GCCGAAGGTG TCGAAACCCT GATTCAGGAA
ACCTACCTGA AAAGCCTTGG TGTAGCCTAT GCACAGGGCT GGCTGTATTC CAAAGCGCTT
ACGCAAGAAG CATTAATTGT GTTTCTGGCA GCAAGGCGAG GAGCGGTGTC AGACGGGCTG
TAA
|
|---|
| Protein sequence | MRKNLLACFQ TLCFKKGFFL LFFSLFFILA LLFALVLEVH SIFKLKQFEE DVETFSTLTL
EHAGEIMAQA TSALDKLEEY RLPYCEDPHL NMLRKVAYDN DYIQDVVYID GNRPRCSSML
NDINTLFLPK PDFVYKSVYG VWYNVESPLN RNKRMIYVGA THHFVVLNPR SFLDIPSHSH
NIRCTLLERK KKNGQVILSD SIDGSVFPRL ITGENRADRF YIDSKYYVLK PLSNSNLALV
VSADKPVSTT RYLTIFFSSL PLFFLFSLLL STLISRRTLT IQSPRYVLNQ ALKQKEFKLH
YQPIIELNTA QVVGCEALIR WCHSDGRVIM PDSFIPMIRQ VGLMKAMTLY VIDEALQTAC
VLKKSYPEMF VSINLEAAEF EDISIFNYLV EYIAVHGLEG TNINVELTES SMIEPQKAGL
MVELYQQKSI DVAIDDFGTG YAGLSYLERV KANKLKIDKS FVWNINNHSP GDIVLSHIVS
MAHCLNQQIV AEGVETLIQE TYLKSLGVAY AQGWLYSKAL TQEALIVFLA ARRGAVSDGL
|
|---|
| |