Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3324 |
Symbol | |
ID | 8531739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3648358 |
End bp | 3649092 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | GntR domain protein |
Protein accession | YP_003260670 |
Protein GI | 261822564 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTTAT ATCAGCAGAT TGGTGACAAT CTTCGCGCGG AAATTCTGAA AGGAAACTAT CAGATTGGCG ATCGCTTGCC TCCCGAGCGT GATATTGCTG AAACCTACAA CGTTAGTCGT AGCGTGGTAC GTGAAGCCCT GATCATGCTG GAGCTGGAAA AGCTGATTGA GGTACGCAAA GGTTCGGGCG TTTATGTTAT GCAACTCCCG ACCGCGCAGG GGAAAGATAG CGTAGTCGAC AGCGGCTATG GCCCTTTCGA GCTGATGCAG GCGCGCCAAC TGCTGGAAGG TGAGGTTGCT GCATTTGCCG CGATGCAGGC CACCAAAAGT GACATTGTGA AAATGCGACA GGCCATTGAA CAGGAAAGGG CATCGCTTGA GAACGGCAGC GTGGATGAAA GCGCTGATGA ACAGTTCCAT TGCCTGTTGG CACAATCCAC TCAAAACAGT GTCTTAGCCA ACATGGTGTA TGAGGTGTGG CAAGCGCGTA AGCGCAGTCC AATGTGGCAG GGAATTCACT CTCATACCGA TGATTTCAGC TATCAGCGCC AGTGGTTGGA CGATCATGAA CAGATCTTGC GGGCCGTATC TCGTCGTGAT GTGAATATGG CGCGTCAGGC GATGTGGCAG CATCTGGAGA ATGTAAAAAT TAAACTGCTG GAAATCTCGA ATGTGGACGA TCCGACCTTT GACGGCTACC TATTCGAGTC CGTTCCTTCC CGCCTGGAAT CTTAA
|
Protein sequence | MRLYQQIGDN LRAEILKGNY QIGDRLPPER DIAETYNVSR SVVREALIML ELEKLIEVRK GSGVYVMQLP TAQGKDSVVD SGYGPFELMQ ARQLLEGEVA AFAAMQATKS DIVKMRQAIE QERASLENGS VDESADEQFH CLLAQSTQNS VLANMVYEVW QARKRSPMWQ GIHSHTDDFS YQRQWLDDHE QILRAVSRRD VNMARQAMWQ HLENVKIKLL EISNVDDPTF DGYLFESVPS RLES
|
| |