| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3320 |
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| Symbol | |
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| ID | 8531735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3642719 |
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| End bp | 3643888 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_003260666 |
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| Protein GI | 261822560 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCA TCACGATCCA TGATGACCTG AGACGCCAGG GTCGACGCGT ATCCGTCATT
ATCTGGCTCA GCCTGCTGGG GCTGGTCGTC TTTTTTGTCT GGGCCAAATT CGCCGTGCTG
GATGAGGTAT CGGTCGGGAC CGGCAAGGTG ACGCCCTCGA CCCGCGCCCA GGTGATTGAA
AGCCTGGATG GCGGGATCAT CGGTCAGTTG TACGTGCAAC AGGGCAATGT CGTCGAGAAA
GGGCAGGTAT TGGCACAGTT GGACATCAAC CGCTTTCAGT CCGTCTACGG CGAAGCGTTC
TCCCGCGTAC AGACGCTGCG AGCGTCTGCT GAACGTCTGT ACGCCGAACT CAGCGGCGAA
CCGCTAAAAT TCAGCGCGGA AACCATGAAG GAGCCTGCAC TGGCCGCACG TGAACGTCAG
CTTTATGAAT CACGCCTGCG CAATCGCGAT GAAACGATCG CCAACCTGCA ACAGTCTATG
CGACTGGTCG AGCAGGAGCT ACGCATGACG GAGCCGTTGG TGCAGCGCGG GGCCGCCAGC
GCCGTCGAAG TGATCCGGTT ACGCCGCCAG ATTAGCGAAA TCCGCGGCAA AATCGACGAA
GCCAGCAACC AGTATGCGGT GCGGGCGCGA GAAGAACAGG TTAAAAACAA CGCCGATCTG
GAAGCGCAGC GGGAAGTGGT CAGCGGGAAA GCCGATCAGC TCAAGCGTGC TACCATCACC
TCACCGGTGC GCGGAATTGT GAAAGACATT CAGGTCACGA CCGTCGGCGG CGTGCTGCAA
CCGGGTGGTA AACTGATGGA GATCGTACCG CTGGAAGATC AGTTGCTGAT TGAAACACGC
ATCAACCCAC GTGATATTGC CTATATTCGG CCGGGTTTGC CCGCCACGGT AAAAATCACC
GCCTATGATT CTTCCATCTA CGGTAATTTA ACCGGCGAAG TCGAAAGCGT GTCGCCGGAT
ACCCTTCAGG ACGAAGTCAG GCGCGACCAG TTTTACTATC GGGTCTATGT GCGTACCACG
CAGGCGGAAC TGACCAACAA GGCCGGTGAA AAATTCCCCA TCGTACCCGG CATGGTCGCC
AGCGTTGAGA TAAGAACGGG ACAGAAAAGC GTCTTAGACT ATTTGGTTAA ACCGCTGAAC
AAGGTCAATG AAGCACTGCG AGAACGTTAA
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| Protein sequence | MSSITIHDDL RRQGRRVSVI IWLSLLGLVV FFVWAKFAVL DEVSVGTGKV TPSTRAQVIE
SLDGGIIGQL YVQQGNVVEK GQVLAQLDIN RFQSVYGEAF SRVQTLRASA ERLYAELSGE
PLKFSAETMK EPALAARERQ LYESRLRNRD ETIANLQQSM RLVEQELRMT EPLVQRGAAS
AVEVIRLRRQ ISEIRGKIDE ASNQYAVRAR EEQVKNNADL EAQREVVSGK ADQLKRATIT
SPVRGIVKDI QVTTVGGVLQ PGGKLMEIVP LEDQLLIETR INPRDIAYIR PGLPATVKIT
AYDSSIYGNL TGEVESVSPD TLQDEVRRDQ FYYRVYVRTT QAELTNKAGE KFPIVPGMVA
SVEIRTGQKS VLDYLVKPLN KVNEALRER
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