Gene Pecwa_3319 details

Gene Information

• Locus tag: Pecwa_3319
• ID: 8531734
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3640569
• End bp: 3642707
• Gene Length: 2139 bp
• Protein Length: 712 aa
• Translation table: 11
• GC content: 57%
• Product: type I secretion system ATPase
• Protein accession: YP_003260665
• Protein GI: 261822559

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAG CAACCAAAAC TGAGATCTGG ATTACGGCGA TGGCACGCGC CGCCGCCCAC 
TATGGGCAAG TGGTCGATAC CCAGTCGGTG CGCCAGCAGA TGCGCTGGTA CGAACAGCAG 
CCCATTGCCC GGCAGTTAGA ACAAATCAGC CACCTGATGG GGGTAACCAT CAGCCTGCGA 
CACACGGAGA AAATCCGCTG GCGCAATAAG ATGCTACCCG TGCTGGCGGA AACCGATGAC 
GGTAGTGTGA TCGTCATCGA ATCATTAAAT GACGAGGGAA CCGCGACCTA CTGGCTGAAT 
GACGGCGGCG ACCTTCGGCG TGAAGCCGAA CTGACCGAAC TCATCAAACA CAGTCAGGGC 
ATTATCGTGC TAGTCGGCAT CGCAGAGCGT GGTCGCGATA CCCGAATCGA TGACTTTGTC 
AAACCGTACC GCAAGCACTG GTTCTGGCAA CATTTTCGCG GCGCAAAACG ACAGATCGGA 
GAGATCTCTC TGGCATCTAT TGTGGGTAAC GTGCTCGCGC TGGCAGGGAT TCTGTTCTCC 
ATGCAGGTGT ATGACCGCGT GATCCCGGCA CAGTCAATTC CCACGCTGTG GGTACTGTTT 
TTCGGCGTGC TGCTGGCTGC GGCATTAGAG TATGCCATCC GTTTGTCGCG CACCGTCGTC 
TCCGATTTGA TGGGCAAGAG CATCGATTTG CACGTATCGG GGATGCTGTT CGCTCGCGCG 
CTGGCGATAA AAAATGAGGC CCGGCCTAAG TCCACTGGCT CGTTTATTTC GCAACTGCGG 
GAAATCGATC AGGTTCGTGA ACTGCTGACC TCAACCACCG TCGGTGCCGC CGCCGATATG 
CCGTTCGTCT TTCTGTTTCT CGGTATCATG GCGATGATCG GCGGGCCGCT GGTGCTGATC 
CCTATGCTGG CGATCCCGCT GATTGTGATC CCCGGCCTGA TGCTGCAATG GCCGATGGCA 
AAACTCGCTA AAGAAGGCAT GCGCGAAAGC GCGTTGCGTA ATGCGGTACT GGTCGAGTCG 
ATTGAAGGGG TCGAAGACAT CAAAGCGTTA CAGGCGGAGC CTTACTTTCA ACGTCAGTGG 
GAGCAGACGC ACGAAGTTAG CGCCTCCATC GGGATGAAAC AGCGCGTTTG GGGAGCACGG 
CTCAGCGGCT GGGCGTCAAC CGTCCAGCAG TTAACCTATG CCGGCATGCT GGTGTTCGGC 
AGCTATCTGG TGCTGGCTGG CGACATCACC ACCGGTACGC TCGTGGCCTG TAGCCTGCTC 
TCTTCCCGCA CCATCGCCCC ACTCATGCAG TTAACGATGG TCTTTTCCCG CTGGCAGCAC 
GCGAAAACCG CCATGACCGG GCTGGATGAT TTGCTGCAAA AACCGCTGGA TCGACCAGAA 
GATGGAAAAA TGGCGCACTG CCCGATCCTT CAAGGGCACT TCCAACTCCA CAACGTGCAG 
TACAGTTACG ATCCCGAGCA GGGCGATACC GCCTTGCAGA TCGGCAAACT GGAGATTAAA 
CCGGGCGAAA AAGTGGCGCT GCTCGGTAAG GTCGGTGCGG GTAAATCCAC CCTGCTCAAG 
CTGCTTGCCA ATCAGGCTAC CGCGACGCGC GGCAAGGTGA TTATTGATGG CGTGGATATC 
AGCCAGATCG ATCCAGTAGA TGTCCGCCGC CAATTGGGCT TCCTGTCGCA GGAATCACGC 
CTGTTCTTCG GTAGCCTGCG GCAAAACCTG ATGCTCGGCA ACCCGCATGC CACTGAACAA 
GAGCTGTTGC AGGCGCTACA CATTAGCGGC GCACTCAGCC TGATCCAACA GGATGCCGCC 
AGCCTGGATC GCATTATTCA TGAAGGCGGG CGCGGTTTAT CCGGCGGGCA GCGGCAAATG 
ATCCTGCTCA GCAGAATGCT GTTACGCCAT CCTCAGATTG TGCTGCTGGA TGAGCCTACC 
GCATCCATGG ACGAACAGTT GGAAGGTCAC GTTATTAACC AATTAAGCAA TTGGCTCACG 
GGCCGCACGC TGGTCCTCGT GACGCATCGG CCGGCACTGC TCAAGCTGGT TGACCGCGTG 
ATTGTCATGG ATGGCGGACG CATCGTGGCA GATGGCCCGC GTGACCAGAT GTTGAAGGCC 
ATCAACAAGC CAGCAGAGAC CGCACAGAGC GTGGCGTAA 

 

Protein sequence

MTQATKTEIW ITAMARAAAH YGQVVDTQSV RQQMRWYEQQ PIARQLEQIS HLMGVTISLR 
HTEKIRWRNK MLPVLAETDD GSVIVIESLN DEGTATYWLN DGGDLRREAE LTELIKHSQG 
IIVLVGIAER GRDTRIDDFV KPYRKHWFWQ HFRGAKRQIG EISLASIVGN VLALAGILFS 
MQVYDRVIPA QSIPTLWVLF FGVLLAAALE YAIRLSRTVV SDLMGKSIDL HVSGMLFARA 
LAIKNEARPK STGSFISQLR EIDQVRELLT STTVGAAADM PFVFLFLGIM AMIGGPLVLI 
PMLAIPLIVI PGLMLQWPMA KLAKEGMRES ALRNAVLVES IEGVEDIKAL QAEPYFQRQW 
EQTHEVSASI GMKQRVWGAR LSGWASTVQQ LTYAGMLVFG SYLVLAGDIT TGTLVACSLL 
SSRTIAPLMQ LTMVFSRWQH AKTAMTGLDD LLQKPLDRPE DGKMAHCPIL QGHFQLHNVQ 
YSYDPEQGDT ALQIGKLEIK PGEKVALLGK VGAGKSTLLK LLANQATATR GKVIIDGVDI 
SQIDPVDVRR QLGFLSQESR LFFGSLRQNL MLGNPHATEQ ELLQALHISG ALSLIQQDAA 
SLDRIIHEGG RGLSGGQRQM ILLSRMLLRH PQIVLLDEPT ASMDEQLEGH VINQLSNWLT 
GRTLVLVTHR PALLKLVDRV IVMDGGRIVA DGPRDQMLKA INKPAETAQS VA