| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3311 |
|---|
| Symbol | |
|---|
| ID | 8531727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3617557 |
|---|
| End bp | 3618834 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | nucleoside transporter |
|---|
| Protein accession | YP_003260659 |
|---|
| Protein GI | 261822553 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA CAGCAAAGCT GTCGTTCATG ATGTTCGTTG AATGGTTTAT CTGGGGAGCC
TGGTTCGTTC CACTCTGGCT GTATCTGAGC AAAAGTGGGT TCACGGCGGG TGAAATCGGC
TGGTCGTATG CCTGTACCGC CATTGCCGCT ATTTTATCGC CGATTCTGGT GGGGTCACTT
ACCGACCGCT TCTTTGCTGC GCAAAAGGTG TTGGCGGTGC TGATGTTCGC CGGAGCGATA
CTAATGTATC TGGCTGCACA GCAAACTGAA TTTATGTATT TCTTCCCGCT GTTGTTGGCG
TATTCATTAA CTTACATGCC CACTATCGCG TTGACTAACA GTATTGCTTT CTCCCACGTT
GGCGACGTGG AACGGGATTT CCCACGTATC CGTGTATTGG GAACGATCGG CTGGATCGCC
TCCGGTATTG TATGTGGCTT TCTGCCGACG TGGCTTGGGT TTAGCGATAT TTCTCCCACT
AATATTCCGT TGCTGATTAC CGCCGCCAGC TCTGCGTTAC TCGGTTTCTT TGCCTTTTTC
CTGCCAGATA CGCAGCCGAA AAGCACTGGC AAGTTGAATG TTAAAGTCAT GCTGGGGCTG
GATGCGATTG TGTTGCTGAA AGACAAAAAC TTTCTGGTGT TTTTTGTCTG CTCCTTCCTG
TTCGCGATGC CACTGGCGTT TTATTACATT TTTGCCACTG GGTTCCTTAC CGAAGTTGGC
ATGAAAAACG CGACGGGTTG GATGACGCTG GGCCAGTTCT CGGAAATTTT CTTCATGCTG
GCGCTACCGT TTTTCACCAA ACGTTTTGGT ATTAAAAAGG TATTGTTGCT GGGGCTGGTG
ACGGCGGCTA TCCGCTATGT CTTCTTCGTC TACGGCGACG CTTATCACTA CTTCACGTAT
GCACTGCTGT TCCTCGGCAT TCTGCTGCAC GGCGTGAGTT ACGATTTCTA CTATGTTACC
GCCTATATCT ACGTTGATAA AAAAGCGCCT GTACACATGC GCACGGCGGC GCAGGGCCTG
ATTACGCTTT GCTGTCAGGG CTTCGGCAGC CTGTTGGGAT ACCGTTTAGG GGGCGTGATG
ATGGAGAAAC TTTTCGCCCA CGGTGAACCG GTAAACGGCC TGACCTTCAA CTGGACCGGC
ATGTGGTTTT TTGGTGCGGT GATGATCGCG ATTATTGCGC TGATCTTTAT CCTGCTGTTC
CGTGAGTCAG ATAAAGCAAT CTCGACGATT GATGTAGAAG GTGCAAATCA GCATTTCAGT
ACAGAGGAAA ACAAATGA
|
|---|
| Protein sequence | MKTTAKLSFM MFVEWFIWGA WFVPLWLYLS KSGFTAGEIG WSYACTAIAA ILSPILVGSL
TDRFFAAQKV LAVLMFAGAI LMYLAAQQTE FMYFFPLLLA YSLTYMPTIA LTNSIAFSHV
GDVERDFPRI RVLGTIGWIA SGIVCGFLPT WLGFSDISPT NIPLLITAAS SALLGFFAFF
LPDTQPKSTG KLNVKVMLGL DAIVLLKDKN FLVFFVCSFL FAMPLAFYYI FATGFLTEVG
MKNATGWMTL GQFSEIFFML ALPFFTKRFG IKKVLLLGLV TAAIRYVFFV YGDAYHYFTY
ALLFLGILLH GVSYDFYYVT AYIYVDKKAP VHMRTAAQGL ITLCCQGFGS LLGYRLGGVM
MEKLFAHGEP VNGLTFNWTG MWFFGAVMIA IIALIFILLF RESDKAISTI DVEGANQHFS
TEENK
|
|---|
| |