Gene Pecwa_3308 details

Gene Information

• Locus tag: Pecwa_3308
• ID: 8531724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3614862
• End bp: 3615608
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 49%
• Product: transcriptional regulator, GntR family
• Protein accession: YP_003260656
• Protein GI: 261822550

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACACG CGCATACTCA ATTAATAGAA CAGCTTACTC AGCGCTTTGC GACAGTAGAC 
AATACTCCGC TCTACCTAAA GTTTGCCGAA ACGGTCAAAA ATGCCGTGCG CAGCGGTGCG 
CTAGAGCATG GCAACATTCT GCCGGGAGAG CGTGACCTGA GTCAGTTAGC TGGGGTGTCA 
CGCATTACGG TACGCAAGGC GATGCAGACG CTGGAAGAAG AAGGCGTTGT TACCCGCGTG 
CGCGGCTACG GTACACAAAT CAATAATATT TTTGAGTATT CGCTGAAAGA AGCGCGCGGA 
TTTTCACAAC AGGTCGTGCT GCGAGGCAAA AAACCCAATA CGCTGTGGGT AAACAAACAA 
ATCGTAAAAA GCAGCAAGGA AGTAGCTGAA CAGTTGGCTA TTGCGCCAGA GACTTCCGTT 
TTTCTGTTAA AACGTATCCG CTATGTGGAT GAAGACGCCG TTTCCATTGA AGAGTCGTAT 
GTTCCTGTTG ATCTGATCGC TGACGCTGAG GATATCGGCG TCTCGCTTTA TGACTATTTT 
CGCAGCCAGA ACATCAATCC GCAGCGTACA CGCAGTCGCG TCAGTGCACG TATGCCCGAT 
GCCGAGTTTC AATCACATAT TCAGCTTGAT AATAAAGTAC CGGTTCTGGT CATCAAGCAA 
ATTGCGCTCG ACCAGCAGAA CCGGCCTATC GAATACAGCA TCAGCTATTG CCGTAGCGAT 
CTATACGTGT TCGTCTGCGA GGAGTAA 

 

Protein sequence

MEHAHTQLIE QLTQRFATVD NTPLYLKFAE TVKNAVRSGA LEHGNILPGE RDLSQLAGVS 
RITVRKAMQT LEEEGVVTRV RGYGTQINNI FEYSLKEARG FSQQVVLRGK KPNTLWVNKQ 
IVKSSKEVAE QLAIAPETSV FLLKRIRYVD EDAVSIEESY VPVDLIADAE DIGVSLYDYF 
RSQNINPQRT RSRVSARMPD AEFQSHIQLD NKVPVLVIKQ IALDQQNRPI EYSISYCRSD 
LYVFVCEE