Gene Pecwa_3294 details

Gene Information

• Locus tag: Pecwa_3294
• ID: 8531710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3595023
• End bp: 3595625
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 52%
• Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
• Protein accession: YP_003260643
• Protein GI: 261822537

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.680689
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCCTGG TAACTCGTCA AGCCCCAGAC TTCACTGCCG CTGCTGTTTT AGGCAGTGGC 
GAAATTGTCG AAAATTTCAA CCTGAAGAAG CACATCAACG GTAAAGCTGC CGTGATCTTC 
TTCTGGCCGA TGGACTTTAC CTTCGTTTGT CCATCAGAAC TGATTGCTTT CGATCACCGC 
TATGCCGAGT TCAAGAAACG CGGCGTAGAA GTGGTTGGGG TTTCTTTCGA TTCTGAGTTT 
GTTCACAACG CATGGCGTAA AACCCCTGTG GACAAAGGCG GCATCGGCGA AGTGCAGTAT 
GCGATGGTTG CTGACATTAA GCGCGAAATC CAGAAGGCCT ACGGCATTGA GCACCCAGAA 
GCGGGTGTTG CACTGCGTGG TTCTTTCCTT ATCGACAAAA ACGGTGTAGT TCGCCATCAG 
GTGGTGAACG ATCTGCCACT AGGCCGTAAC ATCGATGAAA TGCTGCGTAC CGTTGACGCC 
CTGCAATTCC ACGAAGAGCA CGGCGAAGTG TGCCCGGCAC AGTGGGAAAA AGGGAAATCC 
GGTATGGGTG CGTCACCAGA CGGCGTAGCA AAATACCTGT CTGAAAACGC AGACAAGCTG 
TAA 

 

Protein sequence

MVLVTRQAPD FTAAAVLGSG EIVENFNLKK HINGKAAVIF FWPMDFTFVC PSELIAFDHR 
YAEFKKRGVE VVGVSFDSEF VHNAWRKTPV DKGGIGEVQY AMVADIKREI QKAYGIEHPE 
AGVALRGSFL IDKNGVVRHQ VVNDLPLGRN IDEMLRTVDA LQFHEEHGEV CPAQWEKGKS 
GMGASPDGVA KYLSENADKL