Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3289 |
Symbol | secD |
ID | 8531705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3589351 |
End bp | 3591165 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | preprotein translocase subunit SecD |
Protein accession | YP_003260638 |
Protein GI | 261822532 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTCG TGGTGTTGTT TGTCGGCCTG CTCTATGCGC TTCCTAACCT ATATGGTGAG GATCCGGCGG TACAAGTTAC TGGTGCGCGG GGAACCGCCG CCAGCGAAAC GACGCTGATC CAAGTCCAGA ATGTCCTGAA AGAACAAAAT ATTACCAGTA AGTCGATTGC ATTAGAAAAT GGTGCAATTC TGGCTCGCTT CTCTAACCCT GATATTCAGC TCCGTGCGCG TGAAGCGCTC GTTAATGAGC TGGGCGAAAA ATTCGTCGTT GCACTTAACC TTGCTCCTGC TACGCCAACC TGGCTGCGGT TGTTAGGTGC TGAACCGATG AAATTGGGGC TTGACCTGCG CGGCGGCGTT CACTTCCTGA TGGAGGTGGA TATGGATACG GCGCTGGGTA AATTACAAGA ACAAACCATG GACTCTTTGC GCAGCGATCT GCGTGAGAAG AACATTCCTT ATGCCGCTGT ACGTAAGATT GATAATTACG GCGTCGAAAT TCGCTTCCGT GATGCTCAAA CGCGTGATGA TGGCCTCAGC TATCTGACGT CTCGTCATCG TAACCTGGTT CTCAGCAGTA GCGGTGGCAA CCTGATGCGT GCGGTGATGT CGGACGAACG TCTGCGTGAA GCACGTGAAT ACGCCGTACA GCAGAACATC AATATCCTGC GTAATCGTGT GAACCAACTG GGCGTTGCCG AACCGCTGGT ACAACGTCAG GGTTCTGACC GCATCGTCGT TGAATTACCA GGTATTCAAG ACACGGCGCG CGCGAAAGAA ATTCTTGGTG CAACCGCTAC GCTGGAATTC CGTCTGGTCA ACAGCGATGC TGATGCGACA GCGGCGGCAA ACGGCCGTGT GCCGGGCGAT TCCGAAGTGA AGAATATGCG TGACGGTTCA CCCGTTGTGC TGTTCAAACG CGTCATCCTG ACGGGCGACC ACATCACGGA TTCCACATCA AGCAATGACG AATACAATCG TCCTCAGGTG AATATTTCTC TGGACAGCGC GGGTGGCAAC ACCATGTCCA ATTTCACCAA AGACAGTATT GGTAAGCTGA TGGCGACGCT GTTTGTGGAA TACAAAGACA GCGGCAAGAA AGATGCGACG GGTCGTTCAA TACTGGAAAA ACACGAAGAA GTGATCAACG TGGCGACGAT TCAGTCGCGA CTGGGTAACA GCTTCCGTAT TACCGGCATT GATAACCCGA ATGAAGCGCG TCAGCTTTCT CTGTTGCTGC GTGCGGGTGC GCTGATTGCT CCGATCCAGA TCGTGGAAGA ACGTACTATT GGGCCAACGC TGGGGATGCA AAACATCACT CAGGGTCTGG AAGCCTGTTT GTGGGGCTTG ATCGCGTCGA TTCTCTTTAT GGTTTTCTTC TACAAGAAGT TTGGTGTGAT TGCGACCAGT GCATTGGTTG CTAACCTGGT ATTGATTGTC GGTGTGATGT CATTGTTACC TGGCGCTACG CTGACCATGC CGGGTATTGC CGGTATCGTG TTGACGTTGG CGGTTGCCGT GGATGCTAAC GTATTAATCA ACGAACGTAT CAAGGAAGAA CTCAGTAATG GTCGCTCTAT ACAGCAGGCT ATCCACGAGG GCTACAAAGG TGCATTCAGT TCCATTGTTG ATGCGAACGT CACAACGTTG ATTAAAGTCA TCATCCTGTA TGCCGTGGGT ACCGGTTCAA TCAAAGGGTT TGCTATTACT ACTGCGATTG GGATTGCGAC CTCAATGTTT ACGGCGATCG TCGGTACTCG TGCCATCGTT AACCTGCTTT ACGGCGGTAA ACGCATCAAC AAGCTGTCTA TCTGA
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Protein sequence | MLVVVLFVGL LYALPNLYGE DPAVQVTGAR GTAASETTLI QVQNVLKEQN ITSKSIALEN GAILARFSNP DIQLRAREAL VNELGEKFVV ALNLAPATPT WLRLLGAEPM KLGLDLRGGV HFLMEVDMDT ALGKLQEQTM DSLRSDLREK NIPYAAVRKI DNYGVEIRFR DAQTRDDGLS YLTSRHRNLV LSSSGGNLMR AVMSDERLRE AREYAVQQNI NILRNRVNQL GVAEPLVQRQ GSDRIVVELP GIQDTARAKE ILGATATLEF RLVNSDADAT AAANGRVPGD SEVKNMRDGS PVVLFKRVIL TGDHITDSTS SNDEYNRPQV NISLDSAGGN TMSNFTKDSI GKLMATLFVE YKDSGKKDAT GRSILEKHEE VINVATIQSR LGNSFRITGI DNPNEARQLS LLLRAGALIA PIQIVEERTI GPTLGMQNIT QGLEACLWGL IASILFMVFF YKKFGVIATS ALVANLVLIV GVMSLLPGAT LTMPGIAGIV LTLAVAVDAN VLINERIKEE LSNGRSIQQA IHEGYKGAFS SIVDANVTTL IKVIILYAVG TGSIKGFAIT TAIGIATSMF TAIVGTRAIV NLLYGGKRIN KLSI
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