Gene Pecwa_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3289 
SymbolsecD 
ID8531705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp3589351 
End bp3591165 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content51% 
IMG OID 
Productpreprotein translocase subunit SecD 
Protein accessionYP_003260638 
Protein GI261822532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTCG TGGTGTTGTT TGTCGGCCTG CTCTATGCGC TTCCTAACCT ATATGGTGAG 
GATCCGGCGG TACAAGTTAC TGGTGCGCGG GGAACCGCCG CCAGCGAAAC GACGCTGATC
CAAGTCCAGA ATGTCCTGAA AGAACAAAAT ATTACCAGTA AGTCGATTGC ATTAGAAAAT
GGTGCAATTC TGGCTCGCTT CTCTAACCCT GATATTCAGC TCCGTGCGCG TGAAGCGCTC
GTTAATGAGC TGGGCGAAAA ATTCGTCGTT GCACTTAACC TTGCTCCTGC TACGCCAACC
TGGCTGCGGT TGTTAGGTGC TGAACCGATG AAATTGGGGC TTGACCTGCG CGGCGGCGTT
CACTTCCTGA TGGAGGTGGA TATGGATACG GCGCTGGGTA AATTACAAGA ACAAACCATG
GACTCTTTGC GCAGCGATCT GCGTGAGAAG AACATTCCTT ATGCCGCTGT ACGTAAGATT
GATAATTACG GCGTCGAAAT TCGCTTCCGT GATGCTCAAA CGCGTGATGA TGGCCTCAGC
TATCTGACGT CTCGTCATCG TAACCTGGTT CTCAGCAGTA GCGGTGGCAA CCTGATGCGT
GCGGTGATGT CGGACGAACG TCTGCGTGAA GCACGTGAAT ACGCCGTACA GCAGAACATC
AATATCCTGC GTAATCGTGT GAACCAACTG GGCGTTGCCG AACCGCTGGT ACAACGTCAG
GGTTCTGACC GCATCGTCGT TGAATTACCA GGTATTCAAG ACACGGCGCG CGCGAAAGAA
ATTCTTGGTG CAACCGCTAC GCTGGAATTC CGTCTGGTCA ACAGCGATGC TGATGCGACA
GCGGCGGCAA ACGGCCGTGT GCCGGGCGAT TCCGAAGTGA AGAATATGCG TGACGGTTCA
CCCGTTGTGC TGTTCAAACG CGTCATCCTG ACGGGCGACC ACATCACGGA TTCCACATCA
AGCAATGACG AATACAATCG TCCTCAGGTG AATATTTCTC TGGACAGCGC GGGTGGCAAC
ACCATGTCCA ATTTCACCAA AGACAGTATT GGTAAGCTGA TGGCGACGCT GTTTGTGGAA
TACAAAGACA GCGGCAAGAA AGATGCGACG GGTCGTTCAA TACTGGAAAA ACACGAAGAA
GTGATCAACG TGGCGACGAT TCAGTCGCGA CTGGGTAACA GCTTCCGTAT TACCGGCATT
GATAACCCGA ATGAAGCGCG TCAGCTTTCT CTGTTGCTGC GTGCGGGTGC GCTGATTGCT
CCGATCCAGA TCGTGGAAGA ACGTACTATT GGGCCAACGC TGGGGATGCA AAACATCACT
CAGGGTCTGG AAGCCTGTTT GTGGGGCTTG ATCGCGTCGA TTCTCTTTAT GGTTTTCTTC
TACAAGAAGT TTGGTGTGAT TGCGACCAGT GCATTGGTTG CTAACCTGGT ATTGATTGTC
GGTGTGATGT CATTGTTACC TGGCGCTACG CTGACCATGC CGGGTATTGC CGGTATCGTG
TTGACGTTGG CGGTTGCCGT GGATGCTAAC GTATTAATCA ACGAACGTAT CAAGGAAGAA
CTCAGTAATG GTCGCTCTAT ACAGCAGGCT ATCCACGAGG GCTACAAAGG TGCATTCAGT
TCCATTGTTG ATGCGAACGT CACAACGTTG ATTAAAGTCA TCATCCTGTA TGCCGTGGGT
ACCGGTTCAA TCAAAGGGTT TGCTATTACT ACTGCGATTG GGATTGCGAC CTCAATGTTT
ACGGCGATCG TCGGTACTCG TGCCATCGTT AACCTGCTTT ACGGCGGTAA ACGCATCAAC
AAGCTGTCTA TCTGA
 
Protein sequence
MLVVVLFVGL LYALPNLYGE DPAVQVTGAR GTAASETTLI QVQNVLKEQN ITSKSIALEN 
GAILARFSNP DIQLRAREAL VNELGEKFVV ALNLAPATPT WLRLLGAEPM KLGLDLRGGV
HFLMEVDMDT ALGKLQEQTM DSLRSDLREK NIPYAAVRKI DNYGVEIRFR DAQTRDDGLS
YLTSRHRNLV LSSSGGNLMR AVMSDERLRE AREYAVQQNI NILRNRVNQL GVAEPLVQRQ
GSDRIVVELP GIQDTARAKE ILGATATLEF RLVNSDADAT AAANGRVPGD SEVKNMRDGS
PVVLFKRVIL TGDHITDSTS SNDEYNRPQV NISLDSAGGN TMSNFTKDSI GKLMATLFVE
YKDSGKKDAT GRSILEKHEE VINVATIQSR LGNSFRITGI DNPNEARQLS LLLRAGALIA
PIQIVEERTI GPTLGMQNIT QGLEACLWGL IASILFMVFF YKKFGVIATS ALVANLVLIV
GVMSLLPGAT LTMPGIAGIV LTLAVAVDAN VLINERIKEE LSNGRSIQQA IHEGYKGAFS
SIVDANVTTL IKVIILYAVG TGSIKGFAIT TAIGIATSMF TAIVGTRAIV NLLYGGKRIN
KLSI