| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3288 |
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| Symbol | secF |
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| ID | 8531704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3588372 |
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| End bp | 3589340 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_003260637 |
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| Protein GI | 261822531 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACAGG AATACAACAT TGAACAACTA AACCATGGGC GTAAAGTCTA TGATTTCATG
CGCTGGGACA CATTGGCGTT TGTGATTTCC GGTCTGCTGA TCATGATCGC TGTCGCGATC
ATGGGTGTGC GTGGTTTCAA CTGGGGGCTC GATTTTACCG GTGGTACGGT CATTGAGATT
AACCTTGAGA AACCGATCGA TCTCGATGTT CTGCGCAGTT CGTTGGAGAC CTCTGGGTTT
TCAGAACCGC AGGTACAAAA TTTCGGTAGC AGCCGTGACG TGATGGTGCG TATGCCACCG
GTTTCTGGTA GTGAGAACGA AGCGCTCGGC AACAAAGTGC TGACGGTGGT GAATGATACC
TTCCAGCAGC ATGCGACGGT GAAACGTATC GAGTTCGTTG GGCCGAGTGT GGGAAGCGAT
TTAGCACAGG CGGGCGCGTT GGCGCTGTTG TCTGCACTGA TTGCAATCCT CATCTACATT
GGCTTCCGCT TCGAGTGGCG TCTGGCATTA GGTGCTGTGT TGGCGCTAGG GCATGACGTG
ATCATTACGA TGGGGCTACT GTCTTTGTTC AGTATTGAGG TTGATCTCAC GATCATCGCC
TCGCTGATGT CGGTCATTGG TTATTCGCTT AACGATAAGA TCGTTGTGTC TGACCGTATC
CGTGAGAATT TCCGCAAGAT CCGACGCGGA ACACCTTACG AAATTACCAA CATTTCTCTG
ACACAGACGC TGCACCGTAC CATCATCACG TCGGCGACCA CGCTGGCGAT GATTTTAATC
CTGATGTTCT TTGGCGGTGC GTTATTGCAT GGTTTCTCGA TGACAATGTT TATCGGTGTC
ATCATCGGTA CCATCTCTTC TATCTATGTT TCTTCAGCTT TGGCTCTGAA ACTGGGAATG
AAGCGTGAAC ACCTGCTGAT TCAGAAAGTG GAAAAAGAGG GCGCGGATCA ACCGTCTATC
CTGCCTTAA
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| Protein sequence | MAQEYNIEQL NHGRKVYDFM RWDTLAFVIS GLLIMIAVAI MGVRGFNWGL DFTGGTVIEI
NLEKPIDLDV LRSSLETSGF SEPQVQNFGS SRDVMVRMPP VSGSENEALG NKVLTVVNDT
FQQHATVKRI EFVGPSVGSD LAQAGALALL SALIAILIYI GFRFEWRLAL GAVLALGHDV
IITMGLLSLF SIEVDLTIIA SLMSVIGYSL NDKIVVSDRI RENFRKIRRG TPYEITNISL
TQTLHRTIIT SATTLAMILI LMFFGGALLH GFSMTMFIGV IIGTISSIYV SSALALKLGM
KREHLLIQKV EKEGADQPSI LP
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