| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3281 |
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| Symbol | |
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| ID | 8531697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3581814 |
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| End bp | 3583679 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_003260630 |
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| Protein GI | 261822524 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTG ATACCGCGAA GTACCCTACA TTGGCGTTAG TGGAAACACC GGATGAACTT
CGATTGTTAC CGAAAGAGAG CCTGCCAAAA CTGTGCGATG AGCTGCGCCA ATACCTGTTG
GACAGCGTCA GCCGTTCAAG CGGACATTTT GCTTCAGGGT TAGGGACGGT TGAATTAACG
GTTGCACTGC ATTACATCTA TAACACGCCT TTTGATCATC TGGTGTGGGA TGTTGGTCAT
CAGGCTTATC CGCATAAGAT CCTGACGGGC CGTCGCGATC GTATTTCAAC AATCCGCCAA
AAAGGCGGTT TGCACCCCTT CCCGTGGCGT GATGAAAGCG AATATGACGT ATTAAGCGTC
GGACATTCCT CCACCTCAAT CAGTGCCGGG TTGGGTATGG CCGTCGCGGC CGAGCGTGAA
GGTAGAGGTC GCCGTACCGT TTGTGTGATC GGCGACGGCG CGATTACTGC AGGTATGGCC
TTTGAAGCGA TGAACCACGC AGGCGACATC AAATCCGATC TGCTTGTTGT ACTGAACGAC
AATGAAATGT CGATTTCGGA AAACGTCGGC GCATTGAACA ACCATCTGGC ACAACTATTA
TCCGGCAAGC TCTACGCCAG CCTGCGTGAA GGCGGTAAAA AAGTTTTATC CGGCCTGCCT
CCCATCAAAG AGTTAGTGAA GCGCACCGAA GAACATCTTA AAGGCATGGT TGTACCGGGC
ACACTATTTG AAGAGCTGGG CTTTAATTAT ATTGGCCCAG TCGATGGTCA TGACGTTCAG
GCGCTGGCGC ATACGCTGAA GAACATGCGT AATCTGAAAG GCCCGCAGCT TTTGCACATC
ATGACGAAGA AAGGCAAAGG TTACGCGCCT GCCGAGCAGG ATCCAATCAG TTGGCACGCA
GTGCCAAAAT TTGATCCCGC CAGCGGCACA TTGCCAAAAA GCAAAGAAGG TGCCCAACCC
ACCTATTCCA AGATCTTTGG TCAATGGTTA CAGGAAACCG CCGCCAAAGA CAGCAAGCTC
ATGGCAGTCA CACCAGCGAT GCGCGAAGGT TCCGGCATGG TGCAATTTTC GCGCGACTAT
CCGCAACAAT ATTTTGACGT AGCGATTGCC GAACAGCATG CTGTCACGTT TGCTGCTGGC
CTAGCAGTCG GTGGTTATCA TCCCGTCGTC GCGATTTACT CAACTTTCCT GCAACGTGCT
TACGATCAGG TTATCCACGA TGTAGCGATT CAGAATCTAC CGGTTCTTTT TGCTATCGAT
CGCGGTGGTA TTGTTGGTGC CGATGGGCAA ACGCATCAAG GCGCGTTCGA TCTCTCTTTC
TTACGCTGTA TCCCGAATAT GGTCATCATG ACGCCCAGCG ATGAAAATGA ATGTCGTCAG
ATGTTGCACA CTGGCTATCA CTACCAAAAA GGCCCTACCG CGGTACGCTA CCCGCGTGGA
AACGGTACGG GTACGGAACT GACGCCATTA TCAGAACTGC CAATCGGCAA AGGTATGGTG
CGTCGTCAGG GTGAAACAAT CGCTATTCTG AATTTTGGTA CGCTATTACC GGAAGCGCAG
ATTGCGGCTG AGAAGTTGAA CGCCACACTC GTCGACATGC GTTTTGTGAA ACCGCTGGAT
GAAGCGTTAC TTGAAGAGCT GGCACAGTCT CACAGCACAT TCGTGACGCT GGAAGAGAAT
GCTGTCATGG GCGGTGCCGG GAGCGGTGTG AATGAATTTC TGATGGCGAA ACGCCTTGCC
GTCTCAGTGC TAAACATTGG GCTACCGGAT ATATTTATTC CGCAAGGTTC GCAGGAAGAA
ATCCGTGCCG ATCTCGGTCT GGATGCCGCT GGCATTGAGC GCAACATCAT ACAGTGGATG
AAATAA
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| Protein sequence | MSFDTAKYPT LALVETPDEL RLLPKESLPK LCDELRQYLL DSVSRSSGHF ASGLGTVELT
VALHYIYNTP FDHLVWDVGH QAYPHKILTG RRDRISTIRQ KGGLHPFPWR DESEYDVLSV
GHSSTSISAG LGMAVAAERE GRGRRTVCVI GDGAITAGMA FEAMNHAGDI KSDLLVVLND
NEMSISENVG ALNNHLAQLL SGKLYASLRE GGKKVLSGLP PIKELVKRTE EHLKGMVVPG
TLFEELGFNY IGPVDGHDVQ ALAHTLKNMR NLKGPQLLHI MTKKGKGYAP AEQDPISWHA
VPKFDPASGT LPKSKEGAQP TYSKIFGQWL QETAAKDSKL MAVTPAMREG SGMVQFSRDY
PQQYFDVAIA EQHAVTFAAG LAVGGYHPVV AIYSTFLQRA YDQVIHDVAI QNLPVLFAID
RGGIVGADGQ THQGAFDLSF LRCIPNMVIM TPSDENECRQ MLHTGYHYQK GPTAVRYPRG
NGTGTELTPL SELPIGKGMV RRQGETIAIL NFGTLLPEAQ IAAEKLNATL VDMRFVKPLD
EALLEELAQS HSTFVTLEEN AVMGGAGSGV NEFLMAKRLA VSVLNIGLPD IFIPQGSQEE
IRADLGLDAA GIERNIIQWM K
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